Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04761 ATGTCTTCCCAACATGAAAATTCTGACATGAAAGATCTACCAGGTCCTCACAAAAGGATATCAAATTTGATGCATCAAGCTGGAAATAAGTTTTGCGCCGATTGCGGAACTCCAGAGCCGAAATGGGTATCCTCAAGTCTTGGAGTATTTATTTGCATAAAGTGTTCTGGCATACATAGAAGTTTAGGAGTCCACATATCAAAGGTTGCGTCGTTGAAGTTAGATGAATGGTCAGAGGAACAAGTCGACGCATTAGAGAAGTTAGGTGGAAATACATTGTTAAATAAAAAATACGAAGCTTTCCTCCCAAGTAATATAAAAAAACCAAAACCACATACCTCGATCGAAGACCGCTCCGATTATATCAGGAAAAAATATGAGCAACTACAGTTTATGGAGTGTGATGACAATTCAGCATGTGCAATCGTACCAGCTCGAGGAAGAAGTTTATCAATGGCTCAGAGTAGTTCTTCGTGTTACACTTTTCATATGGAAAACAAAAAATACGACAAAACCCCAACCAAACATCGCATTGGAAACGCGTTTCGAAATAGCTGGACAAGAAAAGATTCGGAGCACAAGTCTTCGAAGAAGAGCTCCTCGTTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTTGTGAAAGGCACTCACCTGGCTGTTAGAGATGTAATGACGAGTGACCCGTATGTGATCCTTTCTTTGGGACACCAATCCGTAAAAACGCGTGTTATAAAGAATAATTTGAATCCAGTTTGGAATGAAAGTTTGATGCTATCAATTCCAGAAAACATCCCTCCCCTTAAAGTGCTAGTGTATGACAAGGATACATTTTCAACCGACGATTTCATGGGCGAAGCTGAAATAGACATTCAACCACTAGTTTTAGCTGCGATTGCATATGAAAAATCTACGGTGAACGAGTCGATGCAGCTAGAGAAATTTGTAGCAAGCAGGGACAACTCTCTTGTAAGAGATGGTGTGATATCTCTTGATGAAGGGAGGATCAAACAAGAAATCTCAGTGAGGCTACAGAATGTTGAGAGAGGAGTTCTTGAGATTGAGCTTGAGTGTGTTCCTCTTACTCAATAG 1101 0.4024 MSSQHENSDMKDLPGPHKRISNLMHQAGNKFCADCGTPEPKWVSSSLGVFICIKCSGIHRSLGVHISKVASLKLDEWSEEQVDALEKLGGNTLLNKKYEAFLPSNIKKPKPHTSIEDRSDYIRKKYEQLQFMECDDNSACAIVPARGRSLSMAQSSSSCYTFHMENKKYDKTPTKHRIGNAFRNSWTRKDSEHKSSKKSSSLAGMVEFVGLIKVNVVKGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVLAAIAYEKSTVNESMQLEKFVASRDNSLVRDGVISLDEGRIKQEISVRLQNVERGVLEIELECVPLTQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04761 366 CDD ArfGap 20 126 - -
Vivi7g04761 366 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 14 366 IPR044518 GO:0005096|GO:0005543
Vivi7g04761 366 Pfam C2 domain 211 297 IPR000008 -
Vivi7g04761 366 SUPERFAMILY ArfGap/RecO-like zinc finger 18 132 IPR037278 -
Vivi7g04761 366 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 139 IPR001164 GO:0005096
Vivi7g04761 366 FunFam stromal membrane-associated protein 1 isoform X1 2 137 - -
Vivi7g04761 366 CDD C2_ArfGAP 209 353 - -
Vivi7g04761 366 Gene3D C2 domain 208 365 IPR035892 -
Vivi7g04761 366 SMART arf_gap_3 17 139 IPR001164 GO:0005096
Vivi7g04761 366 SMART C2_3c 211 306 IPR000008 -
Vivi7g04761 366 Gene3D Arf GTPase activating protein 2 139 IPR038508 -
Vivi7g04761 366 Pfam Putative GTPase activating protein for Arf 18 133 IPR001164 GO:0005096
Vivi7g04761 366 ProSiteProfiles C2 domain profile. 193 308 IPR000008 -
Vivi7g04761 366 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Vivi7g04761 366 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Vivi7g04761 366 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Vivi7g04761 366 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 208 366 - -
Vivi7g04761 366 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 207 301 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04761 Vivi-Chr7 122049278 122052547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04761 14 366 C2H2 Transcription Factor Family AT4G21160 46.893 4.99e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04761 K12486 - gmx:100789552 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g07244 3 201956980 201960709 Vivi7g04761 7 122049278 122052547 PCT