Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04759 ATGGAGTCTTTAGTTCTTAAACTCCATGAAATCTCAGCAGTCAAATTTGGAAACTTCAAGCTCAAATCCGGGATCTCCTCGCCAATTTACATAGACCTCCGCCTTGTTATATCTTATCCTTCTGTCCTCCGACAAATTTCTCAAACTATGATTTCTTCTGTCTCGGACACTAAATTCGACCTTGTCTGCGGTGTCCCTTATACCGCTCTTCCTATTGCCACATGTGTGTCTGTCACTCACAACATCCCTATGGTCATGCGCCGCAAGGAAATCAAAGACTACGGAACTTCTAAAGCCATTGAAGGTGATTTTCAGCATGGCCAAAGTTGCTTGATAATTGAGGATTTAGTTACTAGTGGCACATCGGTTTTGGAAACTGCTGCGCCGTTGCGTTCCACGGGGTTGAAGGTCCGTGATGCTGTTGTTTTGATTGATAGAGAGCAAGGTGGAAGACAAAATTTGGAGAGGAATGGAATCAAGTTGCATGCGATTCTTAAATTGACTGAAATGGTGAAAATTTTGAGGGAAAAAGGAAGGCTTGATGAGGAGATGGTTAGAGTTGTTATAAGGTTCTTAGAGGAAAATCAGAAAGTTGCGTCCTTGGAAAATAAAACTAAGTTCAAGAAGGCACTGTCGTATTTGGAGAGAGCTAAGTTGTCCAAGAATCCAATGGGAAAGAGGTTGTTTGAGATTATGGCTGAGAAGGAAAGTAATCTGTGTTTGGCTGCGGACGTTGGAACTACAGCTGAATTGCTTGAAATTGCTGACAAGGTTGGGCGTGAGATATGCTTGCTGAAAACGCATGTAGATATTTTACCAGATTTTACTCCGGATTTTGGCTCAAAGCTTCGTGCGATTGCAGAAAAACACAACTTCTTAATATTTGAGGATCGTAAGTTCGCCGACATTGGTAACACAGTGACCATGCAGTATGAAGGAGGAATCTTTCATATATTGGAATGGGCTGATATCGTAAATGCTCACATTATCTCTGGTCCAGGAATTGTCGATGGACTGAAATTAAAGGGTTTGCCTCGCGGAAAGGGTTTGTTGCTACTTGCTGAAATGAGTTCAGCTGGAAACCTTGCCAAGGGAGATTACACATCTGCTGCAGTGAAAATTGCTGAGGATCATTCCGACTTTGTTATTGGCTTCATCTCAGTCAATCCAGCATCGTGGTCTGGTGCACCGTTAAATCCTTGTTTCATTCATGCAACTCCTGGAGTTCAAATGGCGATCGGTGGTGATGATCTAGGGCAGCAATATAATACTCCATATTCTGTGATCCATGATAAGGGTAGTGACATTATTATCGTCGGGCGTGGCATTATCAAGGCAGCGAATCCGGCTGCAGCAGCTCGTGAATACCGTCTTCAAGGGTGGAGTGCATACTTGGACAAGTGTAAGTAA 1410 0.4312 MESLVLKLHEISAVKFGNFKLKSGISSPIYIDLRLVISYPSVLRQISQTMISSVSDTKFDLVCGVPYTALPIATCVSVTHNIPMVMRRKEIKDYGTSKAIEGDFQHGQSCLIIEDLVTSGTSVLETAAPLRSTGLKVRDAVVLIDREQGGRQNLERNGIKLHAILKLTEMVKILREKGRLDEEMVRVVIRFLEENQKVASLENKTKFKKALSYLERAKLSKNPMGKRLFEIMAEKESNLCLAADVGTTAELLEIADKVGREICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQYEGGIFHILEWADIVNAHIISGPGIVDGLKLKGLPRGKGLLLLAEMSSAGNLAKGDYTSAAVKIAEDHSDFVIGFISVNPASWSGAPLNPCFIHATPGVQMAIGGDDLGQQYNTPYSVIHDKGSDIIIVGRGIIKAANPAAAAREYRLQGWSAYLDKCK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04759 469 NCBIfam orotidine-5'-phosphate decarboxylase 239 457 IPR014732 GO:0004590|GO:0044205
Vivi7g04759 469 Gene3D - 1 208 IPR029057 -
Vivi7g04759 469 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 225 IPR023031 GO:0004588|GO:0006221
Vivi7g04759 469 Pfam Phosphoribosyl transferase domain 51 150 IPR000836 -
Vivi7g04759 469 Gene3D Aldolase class I 209 469 IPR013785 -
Vivi7g04759 469 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 1 468 - -
Vivi7g04759 469 SMART OMPdecase_2 238 456 IPR001754 GO:0004590|GO:0006207
Vivi7g04759 469 SUPERFAMILY PRTase-like 3 190 IPR029057 -
Vivi7g04759 469 CDD OMP_decarboxylase_like 239 445 - -
Vivi7g04759 469 FunFam Uridine monophosphate synthetase 208 469 - -
Vivi7g04759 469 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 294 307 IPR018089 GO:0004590|GO:0006207
Vivi7g04759 469 CDD PRTases_typeI 58 166 IPR000836 -
Vivi7g04759 469 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 237 456 IPR001754 GO:0004590|GO:0006207
Vivi7g04759 469 FunFam Uridine monophosphate synthetase 1 201 - -
Vivi7g04759 469 NCBIfam orotate phosphoribosyltransferase 8 169 IPR004467 GO:0004588
Vivi7g04759 469 SUPERFAMILY Ribulose-phoshate binding barrel 211 466 IPR011060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04759 Vivi-Chr7 122026112 122030026 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04759 K13421 - gmx:100780481 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g07246 3 201971474 201975243 Vivi7g04759 7 122026112 122030026 PCT