Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04730 ATGGGTGCTGCTTGTTGTGTTGCGGCCAGAGATAAAACTATTCAAAGTGGGCCAACTAGTGAAACCTGGCATAGGAATGTTCGTTGTTCTCCGACATGGAGCTTGAGGTGGGATCATCGAGGACGTGTGGCCGGAGAGGATACTAGTATAAATTGGTTTTCGGATGGTGTCAGCAGCAATGATAGGTTGGAGAATAAAAATGGATCACGTGTATCAGAGGATGGAAGCCCGTCGCAGGATTATCAAAGGAATAGATGGATAAAGTCTCCAGTCTCTGAAGGAGCTGACAGACATACAAAATCGTTTTCTGATCAATCTATTCCAAGGAATGTTTCCATGGATGGGAGAATGGAACAGGTGAATGAGTTGGAAGAGCTATCAGCAGTATCTTGTCCATTTCCTACAAAAACTTCACCAACATTGTCTTCTACTTCGTTGTCAATATCTCCTCTGCCATCTCAAAGCCATCCACCTCCATCGAGCTCAACACCATCAAGGGGGCCCTCCCATTCCACAGGACACCAATTATCACGACAAGTTTCTGATAGCCGAATCATGGGATTTAAGTCACCTAGCAATTTTGATGTATCTGAAGAAACGCCAGTGTTTCCTTCATGGAGCAATGAATATGGTATGCACTCTGGTGGTGGATCTTCAGAATATTGCTCTAGGCCTGGCTTTACCGAGCGGACGGGCAATTCTCCCATGGAAAGTTGGTCATTTGATAGCGAGTCATTTGGTTTTAATTGTGAAAGGTTGGCTAGATTCAGTAATCGGTTTTCAACTTCTCCAGTTGATCCGCAAACATGTGGTGTTTGCTCAAATCTTTTAACTGAAAAGTCTTCCTGGAGCTCTCAAAAGATTGTTGTAAATAATGACCTCTGCGTAGTTTCTGTTCTTATGTGTGGACATGTCTATCATGCTGAATGTTTAGAGAGTATGACACCTGAAATCAACAAGTACGATCCAGCTTGCCCTGTTTGCACTTTTGGCGAGAAACAAGCTCGTAAATTATTTGAAAAAACTTTGAAAGCTGAAATGGATTCAAAAGCTCGAAATAAGAAATCAAGGAACCAAATTATGGATAATGATATTGATGACGGTTCTGTTGTATTTGATCATTTTAAAGATAAAAAGCGTCAAAGTAAGAGTCCTAGAATGGACTCTAGCTCTAGCAAGAGAAGCTCTTCTGGGAAACCTTTTCTGAGTAGACACTTCTCATTTGGCTCAAAGAGTTCAAAATCCATGTTAGATAATCACCCAACCCGAAAAAAGGGCTTTTTCTGGGCAAAATCTAGCAGGGAATAA 1308 0.4174 MGAACCVAARDKTIQSGPTSETWHRNVRCSPTWSLRWDHRGRVAGEDTSINWFSDGVSSNDRLENKNGSRVSEDGSPSQDYQRNRWIKSPVSEGADRHTKSFSDQSIPRNVSMDGRMEQVNELEELSAVSCPFPTKTSPTLSSTSLSISPLPSQSHPPPSSSTPSRGPSHSTGHQLSRQVSDSRIMGFKSPSNFDVSEETPVFPSWSNEYGMHSGGGSSEYCSRPGFTERTGNSPMESWSFDSESFGFNCERLARFSNRFSTSPVDPQTCGVCSNLLTEKSSWSSQKIVVNNDLCVVSVLMCGHVYHAECLESMTPEINKYDPACPVCTFGEKQARKLFEKTLKAEMDSKARNKKSRNQIMDNDIDDGSVVFDHFKDKKRQSKSPRMDSSSSKRSSSGKPFLSRHFSFGSKSSKSMLDNHPTRKKGFFWAKSSRE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04730 435 PANTHER EXPRESSED PROTEIN 1 334 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 376 435 - -
Vivi7g04730 435 SUPERFAMILY RING/U-box 266 329 - -
Vivi7g04730 435 SMART ring_2 270 328 IPR001841 -
Vivi7g04730 435 CDD RING-H2 270 328 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 59 111 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 131 151 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 59 86 - -
Vivi7g04730 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 330 IPR013083 -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 388 416 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 165 199 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 417 435 - -
Vivi7g04730 435 MobiDBLite consensus disorder prediction 131 199 - -
Vivi7g04730 435 ProSiteProfiles Zinc finger RING-type profile. 270 329 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04730 Vivi-Chr7 120876878 120880515 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04730 - - gmx:106795502 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04730 7 120876878 120880515 Vivi7g04730 7 120876878 120880515 ECH