LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g04729	ATGGGGAAGATAGAAAAGAAACACATAAAAATCAAATTTTCATTACCAAAACTAAATTATTTTCTATCACCCTTGTCATCATCATCCATGATGCCTATCCTCCTGGTTTTTCTTCTCTTGTCTTTCTTCTCTTCGCCGTCTTCAGCTGTTCCTTCGGCCGCAAGTTTCCTTCCTAAGGATAATTTTCTCATTGATTGTGGAGCTGAGAATCCTCCTACTTTACCTGATGGAAGACAGTTCAAATCCGATCCACAAGCGAATTCGTTCTTAAAGGCGACCGATGATTACAAAGTTTCTGTCAATGATGTTGATGTTCCTTTACCTATATATCTAAATGCTAGAATCTTCATTCAAGAAGCTAAGTATTCTTTCCATTTGGTTCAATCTGGTTTCCATTGGGTTCGCCTTCATTTCTACCCGATTAAAAACAGTGTTTTCGATCTTCAAAAGGCGACGTTTTCTGTCAATACCGATACTTTTGTTCTTCTTCATAGCTTCAATGTTAACAACACTGATAAAGCTATCCTCAAGGAGTATCTTATCAATGTAACAGATCCACAGTTTACATTGTCTTTTATTCCTTTGAAGAATTCGGCTGCGTTTATCAACGCAATCGAGGTTGTTTCGGCTCCTGATAACCTAATGTTCGATAACGGGGCTGGACTTTTTCCGGTCGCTGAGGTTACCGGTTTAACAGCCTATGCTTTCCAGCCTGTTTATAGATTGAACAATGGAGGACCTCTTATTACTTCATCTAATGATACACTTGGAAGAACATGGGAATCTGATGAGGCTTATCTTACAAACAAGAATCTTGCAAAGTTTGTTTCTGTTGCTACTAATGTTATTAAGTTTCCTCAAGACACGCCGACGATTTCGCCTTTGACCGCGCCGCAGACGATTTACGCTTCTGCAACTGAGATGGGTGATGCTGGTGTTAACCTGCCAAATTTCAATGTTTCATGGAAGTTTGATGTTGACACTTCTTTTAGTTACCTTGTTAGGTTGCATTTTTGTGACATTGTGAGTAAAGGTCTTAACCAACTTTACTTCAATGTTTATATTAATGGAAAAGTTGCAATTCCTAATTTGGATTTATCCGCGATCACCGGTGCGTTGGCGACGCCGTATTATAAAGATATTGTTGTGAATGCTACATTGATGACTCAAGGTTTGAGTGTTCAAGTTGGTCCTGCAAATGCTGATGGTGGAAATGCTAATGCAATGATGAATGGTATTGAGGTTTTGAAGATAAGCAACACAGTGAATAGTTTGGATGGTGAGTTTGGTGTTGATGGAAGGAGAGTTGGTGGATCGAACCGAGGAACGGTTGCGGCCGTTGGTTTCGCTATGATGTTTGGAGCATTTGTTGGTCTTGGTGCTATGGTGATCAAGTGGCATAAGAGGCCACAAGATTGGCAAAAGAGGAATAGTTTCTCTTCATGGTTGCTTCCTCTACACGCCGGTGACACGAGTTTCATGAGTAGCAAGAATTCAATGGGGAAGAGCAACATTTTCTCATCATCAATGGGACTAGGAAGGATTTTCTCCTTTCATGAAATACAAGAAGCGACGAAAAACTTTGACGCGAAGAACATCATCGGTGTTGGTGGATTTGGTAATGTTTATCTAGGTGTGATCGACGAAGGGACTCAAGTCGCGGTTAAGAGAGGAAATCCACAATCAGAACAAGGTATCAATGAATTCCAAACTGAAATCCAAATGCTGTCTAAACTTAGACATAGACATTTGGTTTCGATGATCGGATATTGCGACGAAAACGAAGAAATGATCTTGGTTTATGAGTACATGCCTAATGGACATTTGAGGGATCATCTTTATGGAAAGAACATGCCAGCACTTTCTTGGAAACAAAGGCTAGAAATTTGCATCGGATCCGCGAGAGGTCTTCATTACCTTCACACCGGAACAGCACAAGGAATCATTCATCGCGATGTTAAGACAACCAACATTTTACTCGACGAGAATTTCACGGCTAAGGTATCTGATTTCGGACTTTCAAAAGACGCGCCTATGGGACAAGGTCACGTTAGTACCGCGGTGAAAGGTAGTTTCGGTTATCTTGACCCCGAGTACTTCAGGAGACAACAACTAACCGAAAAGTCTGATGTATACTCGTTCGGAGTAGTCCTACTCGAGGCACTATGCGCTCGGCCGGCTATTAACCCTCAGTTACCTAGAGAGCAAGTTAACTTAGCGGATTGGGCTATGCAATGGAAGAGAAAGGGTTTGATCGATAAAATCATCGACCCTCTTCTCGTCGGCTCAATCAACCCCGAGTCAATGAAGAAATTCGCTGAGGCGGCCGAGAAATGTTTAGCCGATCACGGTGTAGACAGGCCTTCAATGGGAGATGTTCTTTGGAACTTGGAATACGCGTTGCAACTTCAAGAAGCTTTCACACAAGGAAAGGCTGAGGATGAGAATGAAAACAAAGCTTCTGCTGCTGCTGCTGCTGTTGCTGTTCCAACTTCACCAGCTCCTGCTTCTGCTACTACTATTCCTGAAGACACCCCCACCACACCTAGCCCTGCAGCTCCTCAGCAAGAAGCAAACAACAACAACAATGGTGCTGCCGAAGCTCGTGGTATCGATGATCATTCAGGAACTGCAATGTTTGCACAGTTTAGTAATCTTAATGGAAGGTGA	2670	0.4225	MGKIEKKHIKIKFSLPKLNYFLSPLSSSSMMPILLVFLLLSFFSSPSSAVPSAASFLPKDNFLIDCGAENPPTLPDGRQFKSDPQANSFLKATDDYKVSVNDVDVPLPIYLNARIFIQEAKYSFHLVQSGFHWVRLHFYPIKNSVFDLQKATFSVNTDTFVLLHSFNVNNTDKAILKEYLINVTDPQFTLSFIPLKNSAAFINAIEVVSAPDNLMFDNGAGLFPVAEVTGLTAYAFQPVYRLNNGGPLITSSNDTLGRTWESDEAYLTNKNLAKFVSVATNVIKFPQDTPTISPLTAPQTIYASATEMGDAGVNLPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNQLYFNVYINGKVAIPNLDLSAITGALATPYYKDIVVNATLMTQGLSVQVGPANADGGNANAMMNGIEVLKISNTVNSLDGEFGVDGRRVGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSMGKSNIFSSSMGLGRIFSFHEIQEATKNFDAKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSMIGYCDENEEMILVYEYMPNGHLRDHLYGKNMPALSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLIDKIIDPLLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDENENKASAAAAAVAVPTSPAPASATTIPEDTPTTPSPAAPQQEANNNNNGAAEARGIDDHSGTAMFAQFSNLNGR	889

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g04729	889	ProSitePatterns	Protein kinases ATP-binding region signature.	534	556	IPR017441	GO:0005524
	Vivi7g04729	889	Gene3D	Transferase(Phosphotransferase) domain 1	604	827	-	-
	Vivi7g04729	889	Gene3D	Phosphorylase Kinase; domain 1	490	603	-	-
	Vivi7g04729	889	ProSiteProfiles	Protein kinase domain profile.	528	800	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi7g04729	889	FunFam	Receptor-like protein kinase FERONIA	235	420	-	-
	Vivi7g04729	889	SMART	serkin_6	528	800	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi7g04729	889	Pfam	Malectin-like domain	64	417	IPR024788	-
	Vivi7g04729	889	SUPERFAMILY	Protein kinase-like (PK-like)	511	795	IPR011009	-
	Vivi7g04729	889	MobiDBLite	consensus disorder prediction	810	870	-	-
	Vivi7g04729	889	Pfam	Protein tyrosine and serine/threonine kinase	531	726	IPR001245	GO:0004672\|GO:0006468
	Vivi7g04729	889	FunFam	Putative receptor-like protein kinase	61	211	-	-
	Vivi7g04729	889	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	648	660	IPR008271	GO:0004672\|GO:0006468
	Vivi7g04729	889	Gene3D	-	61	211	-	-
	Vivi7g04729	889	Gene3D	-	236	420	-	-
	Vivi7g04729	889	PANTHER	OS07G0166700 PROTEIN	514	804	IPR045272	GO:0004714\|GO:0006468
	Vivi7g04729	889	CDD	STKc_IRAK	534	798	-	-
	Vivi7g04729	889	FunFam	Receptor-like protein kinase FERONIA	604	819	-	-
	Vivi7g04729	889	MobiDBLite	consensus disorder prediction	833	866	-	-
	Vivi7g04729	889	FunFam	receptor-like protein kinase FERONIA	491	603	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g04729	Vivi-Chr7	120851188	120854327	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi7g04729	56	889	Receptor kinase-like Gene Family	AT4G39110	67.619	0.0	1176

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vivi7g04729		Malectin_like	1.8e-34	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g04729	-		-	tpra:123893803	1528.07