Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04728 ATGGCTTCTGCATCTTCTTCAGTCATCAAAGATGCAAAAGTTCTCATGGTCGGTGCCGGTGGAATTGGATGCGAGCTTCTCAAGACTCTCGCTCTCTCTGGTTTCTCTGATATACACATAATTGACATGGACACTATAGAAGTCAGTAACCTGAACAGACAGTTTTTGTTCCGACAATCCCATGTTGGGCAGTCCAAGGCTAAAGTTGCTAGGGATGCTGTTCTAAAATTTAGGCCCAAGATAAACATTACATCATATCATGCAAATGTCAAAGATCCTGATTTCGATGTGGACTTCTTTAAGAAATTTAATGTTGTTCTTAATGGACTAGACAATCTAGATGCACGTCGACATGTGAATCGCCTGTGTTTGGCAGCTGATGTTCCTTTAGTTGAAAGTGGAACTACTGGATTCCTTGGTCAGGTTACAGTGCATGTCAAGGGAAGAACAGAGTGCTATGAGTGTCAGCCTAAACCCGCCCCCAAGACGTATCCAGTCTGTACTATCACTAATACTCCATCAAAGTTTGTTCACTGTATTGTGTGGGCAAAAGAGCTACTATTTTCCAAGTTATTTGGGGACAAGAATCAAGACAATGATTTAAATGTTCGCTCAAGTGATGCTGCCAGCTCATCTAAAAATGTAGATGATATATTTGAACATAACAATGATGAAGATATTGTTCAATATGGAAGGAGAATATTTGATCATGTATTTGGGTATAATATTGAATTAGCTTTGTCCAATGAGGAGACATGGAAAAATCGAAATAGACCTAAACCTATATACATCAAGGACATCCTGTCTGATGATTTGGCCAAACAGAATGGAAATCTGGACAATGATAATGCTTGTGGCGATGGATTATCAGTTTCTGCCATGTCATCTTTGGGCATGAAGAACCCACAAGATGTCTGGAGTCTTAGAGAAAATTCTAGAATACTTCTCGAAGCACTGAGACTATTTTTCACGAAAAGAGAAAAGGAGATTGGCAATCTAAGCTTTGATAAAGATGACCAGTTGGCTGTAGAATTTGTTACTGCAGCTGCAAACATACGTGCTGCTTCATTTGGAATACCTCTACACAGTCTTTTTGAAGCTAAAGGAATTGCTGGTAACATTGTGCATGCTGTGGCGACAACAAATGCTGTTATTGCTGGTTTGATTGTCATTGAAGCAATTAAGGTGCTGAAAAATGACGTTAATAGATATAGAATGACATATTGTCTGGAACACCCATCAAGAAACCTGCTGCTTATGCCAGTGGAGCCATTTGAACCAAACAAATCATGCTATGTTTGTTCTGAGAGTCCTGTATTGCTCGAAATAAACACAAACCGTTCAAAGTTGAAGGATGTGGTTGAAAAGATCATCAAAGCTAAGCTTGGGATGAACCTTCCACTTGTTATGAATGCTTCAAACCTTCTCTATGAGGCTGGTGATATTGAGGATGACATGGTTGCAATTTATGATGCCAATCTTGAAAAGGTGTTAGCCGAGCTTCCTTCTCCTGTAACCGGTGGTACAATGCTTACAGTAGAGGATTTTCAACAGGAATTGAAGTGCAATATTAACATAAAGCACAGAGAGGAATTTGATGAAGAGAAAGAACCCGATGGCATGGTTCTCTCAGGATGGACTCAACCAGTGTCAGCAGAAGAAACAAAAGACAAATCTGTTGGTAACGGTGCCAACACTTCAGATGCACCGACAGCTGCAGAATCTGAAAACGATGATGATGTTGGTATAGTTTCTCCAGTGAAGAAAAGAAAGCTTCCTGATGATTCCGATAAGCCAAATACTGCTGATGGTGCAAAGCATCAAAAGCAATTACAAGTGATCGATGATGAAGACGATCTTGTTATGCTTGATGGGAATTTAGATGGGTTTAAAAAGAGAAGAGTGTCATAA 1911 0.3977 MASASSSVIKDAKVLMVGAGGIGCELLKTLALSGFSDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPKINITSYHANVKDPDFDVDFFKKFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITNTPSKFVHCIVWAKELLFSKLFGDKNQDNDLNVRSSDAASSSKNVDDIFEHNNDEDIVQYGRRIFDHVFGYNIELALSNEETWKNRNRPKPIYIKDILSDDLAKQNGNLDNDNACGDGLSVSAMSSLGMKNPQDVWSLRENSRILLEALRLFFTKREKEIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLKNDVNRYRMTYCLEHPSRNLLLMPVEPFEPNKSCYVCSESPVLLEINTNRSKLKDVVEKIIKAKLGMNLPLVMNASNLLYEAGDIEDDMVAIYDANLEKVLAELPSPVTGGTMLTVEDFQQELKCNINIKHREEFDEEKEPDGMVLSGWTQPVSAEETKDKSVGNGANTSDAPTAAESENDDDVGIVSPVKKRKLPDDSDKPNTADGAKHQKQLQVIDDEDDLVMLDGNLDGFKKRRVS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04728 636 CDD Uba2_SUMO 13 434 - -
Vivi7g04728 636 Gene3D - 2 107 IPR042449 -
Vivi7g04728 636 FunFam SUMO-activating enzyme subunit 435 585 - -
Vivi7g04728 636 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 441 532 IPR028077 -
Vivi7g04728 636 Gene3D - 435 585 - -
Vivi7g04728 636 Pfam Ubiquitin-activating enzyme, SCCH domain 317 368 IPR019572 -
Vivi7g04728 636 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 9 482 IPR035985 GO:0008641
Vivi7g04728 636 MobiDBLite consensus disorder prediction 581 613 - -
Vivi7g04728 636 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 162 373 IPR023318 -
Vivi7g04728 636 MobiDBLite consensus disorder prediction 551 572 - -
Vivi7g04728 636 FunFam SUMO-activating enzyme subunit 2 1 107 - -
Vivi7g04728 636 FunFam SUMO-activating enzyme subunit 162 373 - -
Vivi7g04728 636 Pfam ThiF family 8 432 IPR000594 -
Vivi7g04728 636 MobiDBLite consensus disorder prediction 551 613 - -
Vivi7g04728 636 FunFam SUMO-activating enzyme subunit 2 8 185 - -
Vivi7g04728 636 FunFam SUMO-activating enzyme subunit 376 409 - -
Vivi7g04728 636 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 9 484 IPR045886 -
Vivi7g04728 636 PIRSF SUMO_E1B 2 618 IPR030661 GO:0016925|GO:0019948
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04728 Vivi-Chr7 120838254 120845915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04728 333 427 EF-hand Containing Proteins AT2G30110 36.000 1.53e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04728 K10685 - gmx:100779926 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04728 7 120838254 120845915 Vivi7g04728 7 120838254 120845915 ECH