Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04724 ATGGCGGACCACGGGACCGCCACCGTGAACGACGGCGAACTAGAACCACGACATAACGAATTCCAAAACAACAGCGTTAACAACGACGACAAGAAGAAAGATAAGAATTCAGATCCCGAGCATTTCTGCTGTCTCCTTCAGCCTCTCACCCCCGACGCTGATCCCGAGTACATCGGCATTCGCCGCCTCCTCCTTCAACGGAAGGCCGAGGCTGGAATTCTCCGCCGCAGGGATTGGAGATGCAATGGGAAAACGTATGTCGCATACCGGAATTACATAAGCAGGCCTAGGAACTGGGAAAGTTTACGCGGCCCGAACTTTCAAACTACTCCGGGAAACAGTGGCCGATGGATTTCATCTGGAAGTCCACCCTCCCGTTGGTCTGAGGTGGACAGCTGGAGTTCTGGGAGGGATGTCCAAGCTGCAAACTCATTATCCAATCATAGAGCAAGTTTTGGCTCTGTCTCAAATGCAAGTGATTCTGATCGTCCACCACGCCACCGCGGGGCTGAACCTGCCTATTCCTTTGTAGGAATGCATTGCATCTTTGACCAGTGCAAAGCCTCTGTTACGGTGTTAAAGTTTGGGCACATGAGTTCTGACCTACTTGCATACGGGGCATCAGATGGAACCATGACTGTGTGCAGTGTTTCGGAGAAATCTTCAGTCCTCAAACAATTAAATGGCCATTCCAAAGATGTCACAGATTTCGATTTTACATCAAACAATCAGTACATTGCTTCCGCTTCATTGGATAAAACGGTGAGAGTATGGGAGATAGAAAAAGGCATTTGCATACGGGTGATATATGGAGTTTCTTCACAACTGTGTATCCGTTTCCACCCTGTAAATAACAACTTCCTTTCTGTTGGCAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGCACCGGAAGGGTAATCAACAAGGCGGTATTTGACGCTGAAGTTACTGCTATGGACCACGATCATACTGGTCATCTCATATTTTGTGGAGACGCGCAGGGATGTATATACTCTGTAAATATGAACTCCCACACAGGTATATTATCTCGCTCTCATCGTCATCGAAGTAGCAGCAAACACAGATCTCCGGTCACAACGGTGCAATATAGGAGTTTCTCTCTGCTGGCTCGAGGACCTGTGTTGTTGACTTGTACTCAGGATGGAAATCTGTCTTTCTTCAGTGTGGCTTTAGAGATAAAAGGTTATTTAACGCTTCGTTGCTCGCTCAAGTTAACTCCTCGGATACACAAAATTCAAGCTTCTTTCTGTCCCCTTCTTTCTCTTGAGAAAGGAGAATTCATTGTTGCTGGAAGTGAGGACTCAAATGTCTATTTCTATGATCTTACAAAGCCAAAACATACATGTGTAAACAAGTTACAGGGTCATCGGTTTCCTGTGATGGGGATTGCTTGGAACCACGGAGAGAACTTTCTGGCTTCATCTGATTTTTACGGAATAGTAATCGTTTGGAAGAGAGAAAGAACAAATCAGAACAAGAATACATAG 1512 0.4557 MADHGTATVNDGELEPRHNEFQNNSVNNDDKKKDKNSDPEHFCCLLQPLTPDADPEYIGIRRLLLQRKAEAGILRRRDWRCNGKTYVAYRNYISRPRNWESLRGPNFQTTPGNSGRWISSGSPPSRWSEVDSWSSGRDVQAANSLSNHRASFGSVSNASDSDRPPRHRGAEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTMTVCSVSEKSSVLKQLNGHSKDVTDFDFTSNNQYIASASLDKTVRVWEIEKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKAVFDAEVTAMDHDHTGHLIFCGDAQGCIYSVNMNSHTGILSRSHRHRSSSKHRSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMGIAWNHGENFLASSDFYGIVIVWKRERTNQNKNT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04724 503 ProSiteProfiles Trp-Asp (WD) repeats profile. 227 268 IPR001680 GO:0005515
Vivi7g04724 503 MobiDBLite consensus disorder prediction 150 169 - -
Vivi7g04724 503 ProSitePatterns Trp-Asp (WD) repeats signature. 246 260 IPR019775 -
Vivi7g04724 503 Gene3D - 274 423 IPR015943 GO:0005515
Vivi7g04724 503 SUPERFAMILY WD40 repeat-like 184 495 IPR036322 GO:0005515
Vivi7g04724 503 Pfam WD domain, G-beta repeat 224 258 IPR001680 GO:0005515
Vivi7g04724 503 Pfam WD domain, G-beta repeat 457 493 IPR001680 GO:0005515
Vivi7g04724 503 Gene3D - 177 273 IPR015943 GO:0005515
Vivi7g04724 503 MobiDBLite consensus disorder prediction 10 38 - -
Vivi7g04724 503 MobiDBLite consensus disorder prediction 101 133 - -
Vivi7g04724 503 PANTHER WD REPEAT PROTEIN 26-RELATED 173 498 - -
Vivi7g04724 503 MobiDBLite consensus disorder prediction 1 38 - -
Vivi7g04724 503 ProSiteProfiles Trp-Asp (WD) repeats profile. 461 502 IPR001680 GO:0005515
Vivi7g04724 503 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 227 263 - -
Vivi7g04724 503 Gene3D - 429 502 IPR015943 GO:0005515
Vivi7g04724 503 SMART WD40_4 304 342 IPR001680 GO:0005515
Vivi7g04724 503 SMART WD40_4 454 493 IPR001680 GO:0005515
Vivi7g04724 503 SMART WD40_4 262 301 IPR001680 GO:0005515
Vivi7g04724 503 SMART WD40_4 220 259 IPR001680 GO:0005515
Vivi7g04724 503 SMART WD40_4 176 216 IPR001680 GO:0005515
Vivi7g04724 503 SMART WD40_4 352 396 IPR001680 GO:0005515
Vivi7g04724 503 SMART WD40_4 413 449 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04724 199 338 Miscellaneous Gene Families AT5G08390 23.944 5.11e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04724 K24739 - gmx:100792346 849.736