Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04720 ATGGGTTCCGAGAAGAACGAAAACGGAGTCATTTTGAATGTGGAACCTAAACCTAGCAATGGATTCACTTCAAAAGCAGTTGATTTGTTGGAGAAGATTATCGTCAAGATATTTTATGATTCTTCACTTCCTCATCACTGGCTTACTGGTAATTTTGCACCGGTTAAAGACGAGACTCCTCCTGTTAAGGATCTTACTGTGCAAGGCCACCTTCCGGATTGCTTGAATGGAGAGTTTGTTAGGGTGGGGCCCAATCCTAAGTTTTCTCCCGTCGCGGGATATCACTGGTTTGACGGAGATGGAATGATCCATGGTTTGCGTATCAAAGATGGAAAAGCTTCATATGTTTCTCGTTACGTGAAAACTTCTCGTTTTAAACAAGAAGAATACTTCAAAGGTTCTAAATTTATGAAGATTGGAGATCTCAAAGGTCTATTTGGACTGTTAATGGTTAACATACAAATGTTACGAGCTAAATTGAAAGTACTGGATGTTTCTTATGGACACGGAACAGCTAATACAGCTCTTGTATATCATCATCAGAAGCTTCTAGCACTCTCAGAAGGAGACAAACCTTATGCTATTAAAGTTTTTGAAGACGGTGATTTGCAGACACTTGGCTTGCTAGATTATGACAAGAGATTGGGCCATAACTTCACCGCTCATCCAAAAGTTGACCCATTTACTGGGGAGATGTTTACATTTGGATATTCACATTCAGCACCATATGTCACATACAGAGTAGTATCAAAGGATGGTTTTATGCATGATCCTGTTCCAATAACAATATCAGAACCCGTCATGATGCATGACTTTGCCATCACAGAGAATTATTCAATATTTATGGACCTTCCTCTCTACTTTAGGCCAAAGGAAATGGTGAAGAATAAGACATTGATATTCTCATTTGATTCAACCAAGAAAGCTCGTTTTGGAGTCCTACCTCGGTATGCTAAGGATGAGAAGCATATCAGATGGTTTGAACTACCAAATTGCTTCATTTTCCACAATGCCAATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACATGCCGCTTGGAGAATCCAAATTTGGACATGGTCGGCGGGGCTGTCAAGGAAAAGCTTGATAATTTTGCAAATGAGCTGTATGAAATGAGATTCAACATGAAAACCGGCGAAGCTTTTCAAAAGAAACTATCAGCGTCTACTGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGAAGCAACGATACGTGTATGGAACCACGTTAGACAGCATTGCTAAAGTTACTGGGATTATTAAGTTTGATTTGCACGCCGAGCCAGATTTGGGAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAAGGTCTCTATGACTTGGGACCAGGAAGGTTTGGATCTGAGGCTGTTTATGTCCCGCGTGTCCCTGGCACCGATTCTGAAGAAGATGACGGATACTTGATCTTTTTTGTACATGATGAGAATACCGGGAAATCATTCGTGCATGTCTTAGATGCAAAAACAATGTCAGCAGATCCTGTTGCAGTTGTAGAATTGCCTCAACGAGTTCCATATGGTTTCCATGCTTTCTTTGTCACAGAGGAACAACTGCAAGAACAGGCTAAAGTTTAA 1626 0.4077 MGSEKNENGVILNVEPKPSNGFTSKAVDLLEKIIVKIFYDSSLPHHWLTGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRYVKTSRFKQEEYFKGSKFMKIGDLKGLFGLLMVNIQMLRAKLKVLDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHSAPYVTYRVVSKDGFMHDPVPITISEPVMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEKHIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPNLDMVGGAVKEKLDNFANELYEMRFNMKTGEAFQKKLSASTVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDLGKTKLEVGGNVQGLYDLGPGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVLDAKTMSADPVAVVELPQRVPYGFHAFFVTEEQLQEQAKV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04720 541 PANTHER BETA-CAROTENE DIOXYGENASE 50 532 IPR004294 GO:0016702
Vivi7g04720 541 Pfam Retinal pigment epithelial membrane protein 52 530 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04720 Vivi-Chr7 120553980 120558029 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04720 K00465 - gmx:100789210 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04720 7 120553980 120558029 Vivi7g04720 7 120553980 120558029 ECH