Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04694 ATGACAGATCCTCAATCTAACTTTTTTGATGAATGGTTCAATTTCATGCTCCACCACCCTAATCATCATCATCATCATCATCATCATCAACCCTCCTCCTCCTCCACCACAATTAATCCTCCTTCTTCTCCTCCTCTTAGAGAAGCTCTTCCTCTCATTAACAAGCTAAGTCTCATAAATCATCAACAAAATGAACCCTCAAACTCAAACTCAAACACCTTTAACACCACCTCAGTACAAAATGAATATAATCATCATCATCATCATAATCATGTTGATGATGATGGTGATGAAAGTGTTACTGTTGCCCTACAAATAGGGCTTCCTAGAATGAATACTAACTCTTCTTCTGAATTTGGATCAAGAATGGTCTCATCAGAAATGGCTGAAAAAGATGAAGTTAATATGGTTTCTGAAAACCCTTTGGAGAAATTGAACAAGGGTCAGTATTGGATTCCAACTCCTTCTCAAATTCTCATTGGTCCTACACAATTCTCATGTCCTGTCTGCTCTAAAACTTTCAACAGATACAACAATCTTCAGATGCATATGTGGGGACATGGATCTCAATACAGAAAGGGACCAGATTCTCTAAAAGGAACACAACCAACAGCAATGTTAAGGCTTCCATGCTACTGTTGTGCACCAGGATGCAAGCACAACATTGATCACCCAAGAGCAAAGCCTCTCAAAGATTTTAGAACACTTCAAACACATTATAAGAGAAAGCATGGTATAAAACCTTACATGTGTAGAAAATGCGGAAAATCGTTTGCAGTGAAAGGTGACTGGAGAACACATGAGAAGAATTGCGGCAAAATTTGGTATTGTTTATGTGGTTCCGATTTTAAACATAAAAGGTCTCTTAAGGATCATATTAAAGCCTTTGGTTATGGTCATGGTGCTTTTGGTATTGATTGCTTGCAAGAAGAAGATGAAGTGGGTTCAGAAATTGAACATGATGGTGGTGGAAGCTCAATGTGA 984 0.3821 MTDPQSNFFDEWFNFMLHHPNHHHHHHHHQPSSSSTTINPPSSPPLREALPLINKLSLINHQQNEPSNSNSNTFNTTSVQNEYNHHHHHNHVDDDGDESVTVALQIGLPRMNTNSSSEFGSRMVSSEMAEKDEVNMVSENPLEKLNKGQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCYCCAPGCKHNIDHPRAKPLKDFRTLQTHYKRKHGIKPYMCRKCGKSFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGYGHGAFGIDCLQEEDEVGSEIEHDGGGSSM 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04694 327 Gene3D Classic Zinc Finger 164 187 - -
Vivi7g04694 327 SUPERFAMILY beta-beta-alpha zinc fingers 231 269 IPR036236 -
Vivi7g04694 327 PANTHER ZINC FINGER PROTEIN WIP2 15 318 IPR043584 GO:0003700|GO:0010468
Vivi7g04694 327 MobiDBLite consensus disorder prediction 22 48 - -
Vivi7g04694 327 SUPERFAMILY beta-beta-alpha zinc fingers 158 187 IPR036236 -
Vivi7g04694 327 ProSiteProfiles Zinc finger C2H2 type domain profile. 165 192 IPR013087 -
Vivi7g04694 327 Gene3D Classic Zinc Finger 212 299 - -
Vivi7g04694 327 Pfam Zinc finger, C2H2 type 165 184 IPR013087 -
Vivi7g04694 327 ProSitePatterns Zinc finger C2H2 type domain signature. 167 187 IPR013087 -
Vivi7g04694 327 SMART c2h2final6 165 187 IPR013087 -
Vivi7g04694 327 SMART c2h2final6 249 269 IPR013087 -
Vivi7g04694 327 FunFam zinc finger protein WIP2-like 164 187 - -
Vivi7g04694 327 ProSiteProfiles Zinc finger C2H2 type domain profile. 249 269 IPR013087 -
Vivi7g04694 327 FunFam Zinc finger protein WIP2 218 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04694 Vivi-Chr7 119761048 119763688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04694 1 319 C2H2 Transcription Factor Family AT3G57670 56.000 2.99e-124 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi7g04694 zf-C2H2 0.00056 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04694 - - gmx:100794446 500.36