Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04683 ATGGATTATTATGGAGGAAAGATTGGTGGAAGTGATCAAAGAGGTAATGGTGGTGGTGGTGGGCCATGTGGTGCTTGCAAGTTTTTGAGAAGAAAGTGTGTAAAAGGTTGCATATTTGCACCCTATTTTGATTCGGACCAAGGAACGGTTCATTTTGCGGCGGTTCATAAGGTGTTTGGTGCTAGTAATGCCTCTAAGTTACTCATGCGTGTTCCGGTTCATAAACGTCTTGATGCTGTTGTTACTCTTTGTTATGAGGCTCTTGCTAGGGCTAGAGACCCTGTTTATGGCTGTGTTGCTCATATCTTTGCACTTCAACAACAGGTCATGAGCTTGCAGGCAGAGCTAACATATGTTCAGGCGACTCTTGCGACAATGCAGCACCTCCCGATCAACCCTCAAAACTCTTCGCCGACTCTACATTCTTCCGCGAATCACTTAGGAACAAATGCAGACATGATAAGTGCCTCGAATTTCATGTCCATGCACATTGATCCTCATCAACAACTTTCAGCATCATTGGACTTGAGTAGCTTCTTCAATCAATCAGATCAACAACAACTTGAGGATGATGAACTCCAAGCTTTGGCTAGAGAGTTTGTCTCTAGGTACTTGCCTGGAGTGAGATTTCAGCCTTCTAATTCTAACTAG 651 0.4393 MDYYGGKIGGSDQRGNGGGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRVPVHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSLQAELTYVQATLATMQHLPINPQNSSPTLHSSANHLGTNADMISASNFMSMHIDPHQQLSASLDLSSFFNQSDQQQLEDDELQALAREFVSRYLPGVRFQPSNSN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04683 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 20 186 - -
Vivi7g04683 216 Pfam Lateral organ boundaries (LOB) domain 22 120 IPR004883 -
Vivi7g04683 216 ProSiteProfiles LOB domain profile. 21 123 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04683 Vivi-Chr7 119368550 119373566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04683 18 214 AS2 family AT4G00210 56.808 1.57e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g04683 LOB 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04683 - - tpra:123898243 353.214