Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04679 ATGGACAAGGGACCACCTCCTACCCTCTTTGTCAACGATGGTTCATTTATGGAGAGGTTTAGGCAGCTCCAACAAGAGCAGGAGAAGGGAAAAAATTCCAAGCCTGAGGAATCTAAACCAGTTAAAGTTGTTTCAGGATCTCTGAATCCTAAACCCTCCATTAGTAAAGCTAATGATGCTAAGAAATCTTCCCAGGGTAGTTCCAGTGGCAAACTTGCTTTCAGCTTGAAACAAAAGTCAAAGCTTGTGCCGGCCCCTGTTAAGTTGGCTGATGACGATGAAGATGAAATAGATGCTGGTTATGTTTCAAACGATGCACCTACAAAACGACAAAAATTGGTTCAGGATGATGGCATTGAGCAAGTATCAAGACAACTTGATGTTGCACCTCCTCCTCCTCCCAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCCATTTGAGGATGTTACACGGCAAAAAAACCCTGGGGATACACCTTTCAAGTTTTTATTTGATGTTAAATCTTCTGAGTATAAATATTATGAACATCGGCTTGCTCAAGAGGAGAAGGCCCTTTCACAGTCCAAGGAACCACAGGCAAATCAAAATGTGGGGACAAGCATTCCATCTTCCAGACCAACCAATGGTCCTCAGAGATCATCCCAGCAACATTCAGCTTACCAAATCCCTGCCTCTGCTTTATACGATAGTGTTGAAGTGTCAAGGGCTTCTGGATCTTCAGCATTTTCAGTTGGAAGCTCGGATGAGCCCGGTGGATCAACAAGTGCCAGTTCTTTAGCCCTAATGGAGTTTTACATGAAGAAAGCCGCACAGGAAGAAAAGTTCAAACAACCTAAGCATTCAAAAGATGAGATGCCTCCTCCTCCTTCTCTTCAAGTTTCAACTTTTGATGCATCTGCTTCAGGGAAAAAGGGCCATCACATGGGTGATTATATTCCTCAGGAAGAACTTGAAAAGTTCTTGGCTAGCTGTAACGACGCAGCAGCAATGAAAGCTGCCAAGGAGGCTACAGAGAAGGCCAAAATTCAGGCGGATAATGTGGGCCACAGGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGACTAGGTGGCTCTAGGAAGGGTATTTCAGATCCTATCATGGCAGGCAATGTGAAGAAAGATAACTTGGGGGTAGGTGCTGTCCAACCTGGAGAAGTGACTCCTGAAGATGACATCTATGAGCAGTACAAAAAGAGGATGATGCTTGGCTACCGTCACAGACCGAATCCTCTGAACAATCCTCGCAAGGCTTACTATTGA 1317 0.4434 MDKGPPPTLFVNDGSFMERFRQLQQEQEKGKNSKPEESKPVKVVSGSLNPKPSISKANDAKKSSQGSSSGKLAFSLKQKSKLVPAPVKLADDDEDEIDAGYVSNDAPTKRQKLVQDDGIEQVSRQLDVAPPPPPSDPTVKKVADKLASFVAKNGRPFEDVTRQKNPGDTPFKFLFDVKSSEYKYYEHRLAQEEKALSQSKEPQANQNVGTSIPSSRPTNGPQRSSQQHSAYQIPASALYDSVEVSRASGSSAFSVGSSDEPGGSTSASSLALMEFYMKKAAQEEKFKQPKHSKDEMPPPPSLQVSTFDASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEATEKAKIQADNVGHRLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04679 438 Gene3D Surp module 126 199 IPR035967 GO:0003723|GO:0006396
Vivi7g04679 438 MobiDBLite consensus disorder prediction 23 38 - -
Vivi7g04679 438 SUPERFAMILY Surp module (SWAP domain) 125 197 IPR035967 GO:0003723|GO:0006396
Vivi7g04679 438 MobiDBLite consensus disorder prediction 152 172 - -
Vivi7g04679 438 Pfam G-patch domain 356 399 IPR000467 GO:0003676
Vivi7g04679 438 MobiDBLite consensus disorder prediction 193 234 - -
Vivi7g04679 438 ProSiteProfiles SURP motif repeat profile. 142 185 IPR000061 GO:0003723|GO:0006396
Vivi7g04679 438 MobiDBLite consensus disorder prediction 196 234 - -
Vivi7g04679 438 SMART G-patch_5 353 400 IPR000467 GO:0003676
Vivi7g04679 438 ProSiteProfiles G-patch domain profile. 355 402 IPR000467 GO:0003676
Vivi7g04679 438 MobiDBLite consensus disorder prediction 23 140 - -
Vivi7g04679 438 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 2 438 IPR040169 -
Vivi7g04679 438 MobiDBLite consensus disorder prediction 48 75 - -
Vivi7g04679 438 Pfam Surp module 141 191 IPR000061 GO:0003723|GO:0006396
Vivi7g04679 438 MobiDBLite consensus disorder prediction 282 317 - -
Vivi7g04679 438 SMART surpneu2 140 194 IPR000061 GO:0003723|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04679 Vivi-Chr7 119293910 119299412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04679 341 438 C2H2 Transcription Factor Family AT5G26610 32.743 8.40e-09 54.7