Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04677 ATGAGTATTGTGTATGCTCATGCTCTCAACTATTCTCAACTTGAGTCAAGCCTTGTTGATACAATTGGTTTTATCAGTGAAGAAACTTTCAGAAATGATAATCAGCAATATTATTCTACCTCAACAAGTTCAGAAATGGAAACAGTGTTTACCAATTCTCAACAATTGGCAGTGAAACAAGAAGAAAAGGAACCTTTTTCATCACACTACAATGGTTATTCTTCTTATGTATCATCTTCGAATCATCAGATGATTTACCAAACTCAGCAGCAGAATCAAGGATTGCCTAATGATTTTGATGCTTCTTTTTTCGCTTCAGAAAACTGTATCACAGAAACTAAAATTGATTCTTCTAAGAATTGCTCCAATCTCATTAGGCACAAGAGTTCCCCTGCTGAGTTTTTCTCCAATTATTCACTTCATAACGATGTTTCTATCAACATGCCACAAATTGTTGAAAATGATGAACACAAAGCACTTCAACCAAATTGTATTAAAAGTAGAAACATGGGAAATTATAATGGTAGCACTAAATGTTACATGCCTAGCTTCACCAATGACTATTGGGATGCTTCTACATTCGGGGCAACAAAAACAACCACTAATAATGCTGAAATCATCTTTTCCACTTCAAATGCTATACAAACTCAGGATTTAGACTTTGGATACCAAAAACTTGGTTTGACCCACCATTTGAGTCTGCCAAGCTCTTCTACAAAGATGGCTAGTATGGACAAGTTTTTTCACATTCAAGGATCTGTTCCATGCAAAATCCGTGCCAAAAGAGGATTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGAAAGAAGAATAAGAATTAGTGCAAGAATCAAGAAATTACAAGACCTTTTCCCAAATTCAGATAAGCAAAGTAGCACAGCTGATATGTTGGATGAAGCAGTTGAATACATTAAAGATCTTAGGAAACAACTTAAGATGTTATCAGACACAAAGGCAAAGTGCAGTTGTAAAAGTAATTAG 1002 0.3563 MSIVYAHALNYSQLESSLVDTIGFISEETFRNDNQQYYSTSTSSEMETVFTNSQQLAVKQEEKEPFSSHYNGYSSYVSSSNHQMIYQTQQQNQGLPNDFDASFFASENCITETKIDSSKNCSNLIRHKSSPAEFFSNYSLHNDVSINMPQIVENDEHKALQPNCIKSRNMGNYNGSTKCYMPSFTNDYWDASTFGATKTTTNNAEIIFSTSNAIQTQDLDFGYQKLGLTHHLSLPSSSTKMASMDKFFHIQGSVPCKIRAKRGFATHPRSIAERERRIRISARIKKLQDLFPNSDKQSSTADMLDEAVEYIKDLRKQLKMLSDTKAKCSCKSN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04677 333 SMART finulus 270 320 IPR011598 GO:0046983
Vivi7g04677 333 Coils Coil 304 324 - -
Vivi7g04677 333 FunFam Transcription factor bHLH130 family 265 333 - -
Vivi7g04677 333 Gene3D - 266 332 IPR036638 GO:0046983
Vivi7g04677 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 264 314 IPR011598 GO:0046983
Vivi7g04677 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 329 IPR036638 GO:0046983
Vivi7g04677 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 75 328 - -
Vivi7g04677 333 Pfam Helix-loop-helix DNA-binding domain 270 314 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04677 Vivi-Chr7 119259613 119261849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04677 122 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 41.629 6.96e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi7g04677 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04677 - - psat:127075773 471.47