Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04674 ATGTGGTCCTTACAATCATTTGCTTTGATTTTAATATTTGTATTTCTTGTATTTGATGTTTGTAGCAATCCCTTGAAGATCATTACTGTTAGTCAATCAGGCAATGCAGATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCACATTCAAATATCCTCTGGTGTTTACAAAGAGCAAGTCTTAATTCCAAAGAACAAATCATGCATTTATTTTGAAGGAGCTGGTAGTGATTCCACAAGTATAGAATGGGGCTCTCATGAAAAAGCTACTTTCGATATAAAAGGAACCAATACTGTTGCAAAGGGCATAACTTTTACGAACACACTGAACAGCCCAGTATTATTAAGCGTCATACAAGCCATAGCTGTCAAAATCCATGCAGATAAATGTGCTTTCTATAGTTGTTCTTTTCTTGGAGTGCAAGATACCATAAACGATGACGATGGTCGCCATTACTACAATAATTGTTACATCCAAGGTGCAACCGATTTCATATATGGAAATGGTCAATCACTCTTTGAGGCAAGTACAATATATTTTTCAAATGGAAAATCTGGTCAATATATGGATGGAGTTATTACAGCACAATTTAGAAATTCGCCGAATGATCCAAGTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGAACAGGATATAAGACTGAACTTGGAAGGGCTATGGGAGCTTATGCAAGAGTGATCATAGCAAATTCTTATCTATCAGATGTTGTTAGACCTGAGGGTTGGAGTCAGAGAAGATATGTTGGCCAAGAAGAAAACCTTACTTTTGTGGAGGAGGGATGCACAGGACCTGGAGCAGATAAATCGAAACGCGTGGAATGGATGAAGCACTTGAGTGGGGATGAACTTGATAAATTCTTGAGTCTCTCTTTTATTGATCAAGAAGGATGGATTTCCAAATTGCCACCTATCATATTGCATTAG 972 0.3724 MWSLQSFALILIFVFLVFDVCSNPLKIITVSQSGNADFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPKNKSCIYFEGAGSDSTSIEWGSHEKATFDIKGTNTVAKGITFTNTLNSPVLLSVIQAIAVKIHADKCAFYSCSFLGVQDTINDDDGRHYYNNCYIQGATDFIYGNGQSLFEASTIYFSNGKSGQYMDGVITAQFRNSPNDPSGFVFKNCNISGTGYKTELGRAMGAYARVIIANSYLSDVVRPEGWSQRRYVGQEENLTFVEEGCTGPGADKSKRVEWMKHLSGDELDKFLSLSFIDQEGWISKLPPIILH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04674 323 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 315 - -
Vivi7g04674 323 Pfam Pectinesterase 28 309 IPR000070 GO:0030599|GO:0042545
Vivi7g04674 323 Gene3D - 26 319 IPR012334 -
Vivi7g04674 323 SUPERFAMILY Pectin lyase-like 26 316 IPR011050 -
Vivi7g04674 323 FunFam Pectinesterase 23 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04674 Vivi-Chr7 119126573 119128152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04674 28 314 Carbohydrate Esterase AT1G05310 39.130 6.03e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04674 - - mtr:25501033 484.567