Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04673 ATGCATTTTTTTCAACCCATTGCTTTAATTTTAATATTTGTAATTCTTTTCTTTGATATTTGTGAATCTGATGATTGTAGCAATCCCTTGAAGACTATTACTGTTAGTCAATCTGGCAAAGAAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATTCAAATTTCATCTGGTGTTTACAAAGAGCAAATATATATTCCAGAGAACAAACCATGCATTTATCTTGAAGGAGTTAGCAGGCAAACCACAAGTATAGAATGGAGTATACATGAGAATGCTACTTTCGATACAAGAGCAAATAATACAGTTCTAAAGGGCATTACTATCGCGAATACATTGAACAACCCAGTAGTAGAGGCGAATGGCATCACACAAGGCGTGGCGGCTAGAATCCATGCAGATAAATGTGTTTTCTATAGTTGTGGTTTTCTTGGAGTGCAAGATACTCTATTTTCTGACATTGGTCGCCATTACTTCAAACAATGTTTCATCCAAGGTGGTGTGGATTTCATATACGGGAATGGTCAATCAATCTTTGAGGATAGTAATATATATTTTTCGATGGGGAAAAATGGTCCGAAAAGCGAAGGAGTTATTACAGCGCATTATAGAAATTCGTCAAATGATCCAAGTGGATTTGTGTTTAATAGATGTAAAATAAGTGGTTCATCAGGAGGAAAGTTTCAACTTGGAAGGTCTATGAAACCTTATGCAAGAGTGATCATAGCAAATTCTTTCTTATCAGATGGTGTTAAACCTGAGGGTTGGAGTCCTAGATTGTGTGTTGGTCAAGAAGCTAAGATTACTTTTGTGGAGGAGAAATGCTCTGGAGATGGATCAAACAAATCGCAGCGTGTGAAATGGATGAAGAGCTTGAGTGAAGCTGAACTTAATAAATTCTTGAGTCCCTCTTTTATTGATCAAGAAGGATGGATTTCCAAATTGCCGACCAACATATTCAATTGA 996 0.3645 MHFFQPIALILIFVILFFDICESDDCSNPLKTITVSQSGKENFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQIYIPENKPCIYLEGVSRQTTSIEWSIHENATFDTRANNTVLKGITIANTLNNPVVEANGITQGVAARIHADKCVFYSCGFLGVQDTLFSDIGRHYFKQCFIQGGVDFIYGNGQSIFEDSNIYFSMGKNGPKSEGVITAHYRNSSNDPSGFVFNRCKISGSSGGKFQLGRSMKPYARVIIANSFLSDGVKPEGWSPRLCVGQEAKITFVEEKCSGDGSNKSQRVKWMKSLSEAELNKFLSPSFIDQEGWISKLPTNIFN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04673 331 Gene3D - 27 329 IPR012334 -
Vivi7g04673 331 FunFam Pectinesterase 27 326 - -
Vivi7g04673 331 Pfam Pectinesterase 33 318 IPR000070 GO:0030599|GO:0042545
Vivi7g04673 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 323 - -
Vivi7g04673 331 SUPERFAMILY Pectin lyase-like 31 327 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04673 Vivi-Chr7 119116082 119117479 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04673 29 322 Carbohydrate Esterase AT1G05310 36.977 4.50e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04673 - - mtr:25501033 454.136