Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04667 ATGCAGTCTCTACAATCATTTGCTTTCATTTTAATATTTGTAGCTGTTGCATTTGATGTTTGTAAATCTGATGATTGTAGTAATCCCTTGAAGATTATTACTGTCAGCCAATCAGGCAAAGCAGATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATCCAAATATCCTCCGGTGTTTACAAAGAGCAAGTCTTAATTCCCATCAACAAGCCATGCATTTATCTTGAAGGAGATGGAAGCCACTCCACAAGTATAGAATGGGGTTCTCATGAGAATGCCACCTTCATATCAAAAGCAGATAATACAGCTGCAAAGGGCATAACTTTTACGAATACACTCAACAGCCCAGTATTATTAGAGGCCACTAACATCACACAAGCAAGAGCTGCTAAAATCCATGCAGATAAATGTGCTTTCTATAGCTGCAGTTTTCTAGGAGTGCAAGATACCCTAAATGATGACTACGGTCGCCATTACTACAATAATTGTTTCATCCAAGGTGCAGTCGATTTCATATATGGGCAAGGTCAATCACTCTTTGAGGAAAGTACAATATACTTTTCGACGGGAAAATCGGGTGTAAAAAAGAATGGAGTTATTGCAGCACAATATAGAGATTCACCAAATGATCCAAGTGGGTTTGTGTTTAATAAATGTAACATAACTGGGACAGGAGGAAAGTTTCTACTTGGAAGGGCTATGGACGCTTATGCAAGAGTGATCGTAGCAAATTCTTACATATCAGATGGTGTTAAACCTGAGGGTTGGAGTCAGACAACATATGTTGGGCATGAATCAAACCTTACTTTTGTGGAGGAGGGATGCAAAGGACCTGGTGCAGACAAATCAAAACGCGTGAAATGGATGAAGAGTTTGAGTCGACCTGAACTTGATAAATTCTTGAATATCTCTTTTATTGATGATGGTGTTGCACCTCGTCGCCAAGCTGATATAGTTTATAATACTTTGGAGGATCTTGCTCATATGGAGGCTGAGCAAGTTCCGGTTGATATTGAGGATATACATGAGGTGCCTGCTGGAGTTGACCAAGTTCATGTTGCTATGGAGGAGGTACCTGTAAACACTGAGCAAGTTCTTATTGTTGATGAAGAGGTATATGTTGCGGCTGAGCAGGTTCTTATTATCGATGAGGATGCTACTCATACAGATATAGAGGCCACGGCTCGTGCTTCTAAGGAGGAATATGTTCACATAGATGGAGCCTTCCAAGGAGGACCTAGTGGATGA 1278 0.4045 MQSLQSFAFILIFVAVAFDVCKSDDCSNPLKIITVSQSGKADFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPINKPCIYLEGDGSHSTSIEWGSHENATFISKADNTAAKGITFTNTLNSPVLLEATNITQARAAKIHADKCAFYSCSFLGVQDTLNDDYGRHYYNNCFIQGAVDFIYGQGQSLFEESTIYFSTGKSGVKKNGVIAAQYRDSPNDPSGFVFNKCNITGTGGKFLLGRAMDAYARVIVANSYISDGVKPEGWSQTTYVGHESNLTFVEEGCKGPGADKSKRVKWMKSLSRPELDKFLNISFIDDGVAPRRQADIVYNTLEDLAHMEAEQVPVDIEDIHEVPAGVDQVHVAMEEVPVNTEQVLIVDEEVYVAAEQVLIIDEDATHTDIEATARASKEEYVHIDGAFQGGPSG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04667 425 SUPERFAMILY Pectin lyase-like 32 319 IPR011050 -
Vivi7g04667 425 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 27 317 - -
Vivi7g04667 425 FunFam Pectinesterase 28 322 - -
Vivi7g04667 425 Pfam Pectinesterase 33 317 IPR000070 GO:0030599|GO:0042545
Vivi7g04667 425 Gene3D - 31 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04667 Vivi-Chr7 118973058 118978373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04667 31 323 Carbohydrate Esterase AT5G47500 36.129 2.23e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04667 - - mtr:25501033 495.738