Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04665 ATGCAGTCTTTTCAACCCATTGCTTTAATTTTAATATTTGTAATTCTTTTCTTTGATATTTGTGAATCTAATGATTGTAGCAATCCCTTGAAGACTATTACTGTCAGTCAATCAGGTAAAGCAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCATGAAGGAAACTCTCAATGGGTTCACATCCAAATATCCTCTGGTGTTTACAAAGAGCAAATATATATTCCACAAAACAAACCATGCATTTATCTTGAAGGAGTTAGCAGGCAAACCACAAGTATAGAATGGGGTATACATGAGAATGCTACTTTCGATACAAGAGCAAATAATACAATTCTAAAGGGCATTACTATCGTGAATACATTGAACAGCCCGGTATTAGAGGCGAATGGCATCACACAAGGCGTGGCGGCTAGAATCCGTGCAGATAAATGTGTTTTCTATAGTTGTGGTTTTCTTGGAGTGCAAGATACTCTATATTCTGACATTGGTCGCCATTACTTCAAACAATGTTTCATCCAAGGTGGTGTCGATTTCATATACGGAAATGGTCAATCAATCTTTGAGGATAGTAATATATATTTTTCGATGGGGAGAAATGGTCCGAAAAGCGAGGGAGTTATTACAGCGCATTATAGAAATTCATCAAATGATCCAAGTGGATTTGTGTTTAATAGATGTAAAATAAGTGGTTCATCAGGAGGAAAGTTCCAACTTGGGAGATCTATGGAACCTTATGCAAGAGTGATCATAGCAAATTCTTTCATATCAAATGGTGTTAAACCCGAGGGTTGGAGTCCTAGATTATGCGTTGGCCAAGAAGCAAAGATTACTTTTGTGGAGGAGAAATGCTTTGGAGATGGAGCAAACAAATCGCAACGTGTGAAATGGATGAAGAGCTTGAGTGGAGGTGAACTAAATAAATTCTTGAGTCCCTCTTTTATTGATCAAGAAGGATGGATTTCTAAGTTGCCGACGAACATATTCAATTGA 996 0.3715 MQSFQPIALILIFVILFFDICESNDCSNPLKTITVSQSGKANFKTIQSAIDSVHEGNSQWVHIQISSGVYKEQIYIPQNKPCIYLEGVSRQTTSIEWGIHENATFDTRANNTILKGITIVNTLNSPVLEANGITQGVAARIRADKCVFYSCGFLGVQDTLYSDIGRHYFKQCFIQGGVDFIYGNGQSIFEDSNIYFSMGRNGPKSEGVITAHYRNSSNDPSGFVFNRCKISGSSGGKFQLGRSMEPYARVIIANSFISNGVKPEGWSPRLCVGQEAKITFVEEKCFGDGANKSQRVKWMKSLSGGELNKFLSPSFIDQEGWISKLPTNIFN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04665 331 Gene3D - 27 329 IPR012334 -
Vivi7g04665 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 27 323 - -
Vivi7g04665 331 Pfam Pectinesterase 33 317 IPR000070 GO:0030599|GO:0042545
Vivi7g04665 331 SUPERFAMILY Pectin lyase-like 31 327 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04665 Vivi-Chr7 118948538 118950129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04665 31 323 Carbohydrate Esterase AT5G47500 34.091 2.10e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04665 - - mtr:25501033 444.891