Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04660 ATGGAAGGAAGAGAAGGTATCAATCCTGGGGTAACAGTTATAGGTGCAGAAGCTCCATCAGCTTATCATGTAGCACCAAGGACTGAAGCTCCAAACCAGGTTCATAACCCTGAAGCAGTAACAGCAGTGGTCGCGCTAGGTGCTGCTGCTGCTGATGCTTCTGCTGTCGTTGTCTCACCGGTGAGTGTAGGTTTGGATGGATCAGTTAAGAAGAAGAGGGGTAGACCAAGGAAGTACGGGCCAGATGGGTCTGTCAACATGGCGTTGTCACCATTGCCTATCTCATCTTCGGCTCCCCCTACTACTAATGACTTCTCGTCCGTCAAGCGAGGGAAACCGCAGGGGATGGAGTACAAGAGGGCAAAAAAAGTTGTCATGGATCATCTTGGTGAGATGAATGGACACGCTGACGGTACAAACTTTATGCCGCATTTCATCACTGTCAATGCTGGCGAGGACATTACGAATAAGGTGATATCGTTTTCGCAACAAGGGCCGCGGGCAATATGCGTCTTGTCGGCTAATGGTGTGATTTCTAATGTTACACTCCGTCACCCAGATTCTTCTGGTGGTACTTTGACTTACGAGGGTCGTTTTGAAATACTTTCCTTGGCTGGATCATTCATGCCTACTGATAACCAAGGAACAAGAAGCAGGGCAGGTGGAATGAGTGTCTCGCTGGCAAGCCCTGATGGCCGTGTTGTAGGCGGTGGAGTTGCTGGTGTTCTTATCGCTGCCACTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCGGGCAAGAGCAGAAACTAAAGAAGCCAAAGTCTGCTGATTATACTGCAGCCACATTTACTCAAGCAAATGAAGTATCTGCAGAACCGCCACCAGCCCAAACTAATAATAATGCTGAAAAAGAGGATGTCATGAGTGGTGGTGGAGGACATGTGCTTCAAAATTCCGGAAACCTCAACTCAAATTTCACCTCTCCTCCGCAGCCCACTGCCTTCCGAAGAGAAAACTGGGTCAACATGCACGCCATGCCAGACACAAGAAAGTCCCCTACTGATATAAACATATCTTTGCCTGATAGTTAA 1077 0.4856 MEGREGINPGVTVIGAEAPSAYHVAPRTEAPNQVHNPEAVTAVVALGAAAADASAVVVSPVSVGLDGSVKKKRGRPRKYGPDGSVNMALSPLPISSSAPPTTNDFSSVKRGKPQGMEYKRAKKVVMDHLGEMNGHADGTNFMPHFITVNAGEDITNKVISFSQQGPRAICVLSANGVISNVTLRHPDSSGGTLTYEGRFEILSLAGSFMPTDNQGTRSRAGGMSVSLASPDGRVVGGGVAGVLIAATPVQVVVGSFLPSGQEQKLKKPKSADYTAATFTQANEVSAEPPPAQTNNNAEKEDVMSGGGGHVLQNSGNLNSNFTSPPQPTAFRRENWVNMHAMPDTRKSPTDINISLPDS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04660 358 MobiDBLite consensus disorder prediction 280 306 - -
Vivi7g04660 358 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 264 - -
Vivi7g04660 358 MobiDBLite consensus disorder prediction 280 300 - -
Vivi7g04660 358 MobiDBLite consensus disorder prediction 89 109 - -
Vivi7g04660 358 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Vivi7g04660 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 318 IPR039605 GO:0003680
Vivi7g04660 358 CDD DUF296 143 256 IPR005175 -
Vivi7g04660 358 ProSiteProfiles PPC domain profile profile. 138 279 IPR005175 -
Vivi7g04660 358 MobiDBLite consensus disorder prediction 67 111 - -
Vivi7g04660 358 FunFam AT-hook motif nuclear-localized protein 1-like 143 274 - -
Vivi7g04660 358 Gene3D - 143 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04660 Vivi-Chr7 118872179 118876319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04660 10 286 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.821 5.07e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04660 - - psat:127075781 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04660 7 118872179 118876319 Vivi7g04660 7 118872179 118876319 ECH
Vivi7g04660 7 118872179 118876319 Vivi7g04660 7 118872179 118876319 PCT