Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04658 ATGGATTATTATGGAGGAAAGATTGGTGGAAGTGATCAAAGAGGTAATGGTGGTGGTGGTGGGCCATGTGGTGCTTGCAAGTTTTTGAGAAGAAAGTGTGTAAAAGGTTGCATATTTGCACCCTATTTTGATTCGGACCAAGGAACGGTTCATTTTGCGGCGGTTCATAAGGTGTTTGGTGCTAGTAATGCCTCTAAGTTACTCATGCGTATTCCGGTTCATAAACGTCTTGATGCTGTTGTTACTCTTTGTTATGAGGCTCTTGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCACTTCAACAACAGGTCATGAGCTTGCAGGCGGAGTTAACATATGTTCAGGCGACTCTTGCGACAATGCAGCACCTCCCGATCAACCCTCAAAACTCTTCTCCGACTCTACAATCTTCCGCGAATCACTTAGGAACAAATGCAGACATGTTAAGTGCCTCGAATTACATGTCCATGCACATTGATCCTCATCAACAACTTTCAGCATCATTGGACTTGAGTAGCTTCTTCAATCAATCAGATCAACAACAACTTGAGGATGATGAACTCCAAGCTTTGGCTAGAGAATTTGTCTCTAGGTACTTGCCTGGAGTGAGATTTCAGCCTTCTAATTCTAACTAG 651 0.4332 MDYYGGKIGGSDQRGNGGGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSLQAELTYVQATLATMQHLPINPQNSSPTLQSSANHLGTNADMLSASNYMSMHIDPHQQLSASLDLSSFFNQSDQQQLEDDELQALAREFVSRYLPGVRFQPSNSN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04658 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 20 186 - -
Vivi7g04658 216 Pfam Lateral organ boundaries (LOB) domain 22 120 IPR004883 -
Vivi7g04658 216 ProSiteProfiles LOB domain profile. 21 123 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04658 Vivi-Chr7 118779826 118783985 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04658 18 214 AS2 family AT4G00210 57.277 1.28e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g04658 LOB 1.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04658 - - tpra:123898243 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04656 7 118667136 118669023 Vivi7g04658 7 118779826 118783985 PCT