Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04656 ATGAGTATGAACTCTAGTTGTAGCGGTAGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTTGTAGTGGTGGTGGAAGTGGTGGTGCTTGTGGCCCTTGCGGCGCGTGCAAGTTTTTGAGGAGGAAGTGTATATCGGGCTGTATCTTTGCGCCTTACTTTGATTCGGAGCAAGGCGCTTCACATTTTGCGGCGGTTCATAAGGTTTTTGGGGCTAGTAATGTTTCGAAGCTGTTGCAAAGTGTTCCGGTGCACAAGCGTCTTGATGCTGTTATTACTATTTGTTATGAAGCTCAAGCAAGGTTGAGAGATCCTGTTTATGGTTGTGTTGCTCATATCTTTTCTCTTCAGCAACAGGTGATGAGTTTACAAGCAGAACTCTCCTACTTACAAGCCCACCTAGCCACATATGGAGTCCCTCAGCCACCACAAGCACTTCCAATGGTCTCTCCTTCATCCCTCCCACCTACATATGACTTATCTTCACTCTTTGATCCTATGGCACAGACTTCTTCATGGGCCATGCAGCAAAGGCCTAATGAGCCTCGTCAATATTTGGGCAGTGGCACATCAACAAGTAGCAATAATGGTGGTGATCTTCAAGTATTGGCAAGAGAGCTTTTGCATAGATATGGATCTGCTCCATCTTCTCATTCTCTTTCCAAATGA 672 0.4702 MSMNSSCSGSGGGGGGGGGGGGCSGGGSGGACGPCGACKFLRRKCISGCIFAPYFDSEQGASHFAAVHKVFGASNVSKLLQSVPVHKRLDAVITICYEAQARLRDPVYGCVAHIFSLQQQVMSLQAELSYLQAHLATYGVPQPPQALPMVSPSSLPPTYDLSSLFDPMAQTSSWAMQQRPNEPRQYLGSGTSTSSNNGGDLQVLARELLHRYGSAPSSHSLSK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04656 223 PANTHER LOB DOMAIN CONTAINING PROTEIN 32 157 - -
Vivi7g04656 223 Pfam Lateral organ boundaries (LOB) domain 34 132 IPR004883 -
Vivi7g04656 223 MobiDBLite consensus disorder prediction 172 200 - -
Vivi7g04656 223 ProSiteProfiles LOB domain profile. 33 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04656 Vivi-Chr7 118667136 118669023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04656 37 210 AS2 family AT4G00220 63.636 2.70e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g04656 LOB 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04656 K21994 - cave:132188187 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04656 7 118667136 118669023 Vivi7g04656 7 118667136 118669023 ECH
Vivi7g04656 7 118667136 118669023 Vivi7g04658 7 118779826 118783985 PCT