Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04618 ATGCCATCGCGTCCGCCTCCTCAACCACCTCTTCCATCCGCCGCAACCATCACAGCTCCCCACCACTACCACCACCGTGAAATGCTAATCGGCGGCTGCATCGCTGCAGCCGTCTTCCTAACAGCAGTGTTAATCTCCGTAGCAATCTTCATCTACAGAAAACTCTCACACAACCGAACGACGCCGTTTGAGCAAAGCCAGAGAAGATTCTCGTTCTCTATACTCCGTCGCGCTTCAAACTCTTTCTCGGCTTCGACGCGCCTCGGACACGGCGGATTCGGTTCGGTTCATAAAGCTACTCTACCGACCGGAGAAACCGTGGCTTTGAAAGTAATGGATTCGCCGGGTTCGATTCAAGGTGAGAGAGAGTTTCATAACGAGCTTTCTCTGTGTTCGAATCTGAGTTCTCCTTTCATTCTTTCGCTTCTCGGTTATTCTTCGGACCGGTCTGGTAGAAAGCTTGTTTTGGTTTACGAACTCATGGAGAACCGGAGTCTTCAGGATGCGCTTTTAGACCGGAGGTGTCCGGAGTTAATGTGTTGGTTGAATCGGTTCGATGTGGCGGTTTCGGTTGCTAAAGGACTTGAGTATCTTCATCATAGCTGTGATCCTCCGGTGATTCATGGTGATGTAAAACCTAGTAATGTTCTTTTGGATCGTGAATTTAGGGCTAAGATTGGGGATTTTGGACTTGCTAGGGTTAAGAGTTTGGAGGATTCTGGAATGGAGATGATGGTGGAGGAGGTTCGTGAGAAGAAAAAGAGAGATGTTGTTGTTGTTGAGGATTGTAGTTCTGTTTCTGTTGTTGAGGAATCAGAGAGTGTTGTTACTAATACTACGGTTGGATTTGATCGGTCGCCGGAGAGTTTTAATGTGAGGGTTTTGGATTCGGATGCTTCGCCCGAGGTGGGGGTTGTTTCGCCGGAGATGAGCGGGGTTGAGAAATTAAGTGTTGTGTCTGATGGTTGTTTTGATAAATTTAGTATTGATAGTGGGAATCAGAGGAAGAGAGGTGGGGGTTGTGTTCGAGGTGGTTCTGGGAGGGATTGGTGGTGGAAGCAAGAGAATAATGGGGGAGGATCTGAATCAGGGAGGGTGAAGGATTATGTTATGGAGTGGATTGGGAGTGAGATAAAGAAGGAGAGACCTAAGAGTAGTGAGTGGGTTGGTTCTGGTTCTTCGATTTGTTCGGGTGTTGGTGATGTGGCTGCGACGGCAAAGGTGGAGGGTAAGAAGAAACAGAGGAAGAAATTGGAATGGTGGGCTTCACTTGATGAGGAGAAGGTTAAAGGGAAGAAGAATAGAAAACCAAGGGAATGGTGGAAGGAGGAGTTTTGTGAGGAGCTTTCGAAAAAGAGTAGGAAGAAAAAGAGAAGCCTCGATTGTCGTGGAGAATCGTGGTGGCAGAGAGACGAGGATGTAGGCAGTGTGGCGGGGGTGAAGAAGAAAAAGAGGAAAAGTAAGAGTAGTAGAGGGAGTATTGATTGGTGGTTGGAAGGTTTAAGCGGCGACCTTAGGAATAATGGAAGGAGAAATAGTCAAGATTGGGGTAATGGTGATATACCAAAGAGTGGAGGAATCAGTAGCACACCAAGTATGAGAGGAACAGTTTGTTACATTGCTCCTGAATATGGCGGCGGTGGACAATTATCTGAGAAATGTGATGTGTATAGTTTCGGTGTTCTGCTTTTGGTTTTGGTTGCTGGAAGAAGACCACTTCAAGTAACAGCATCACCAATTTCAGAATTTGAAAGAGCAAATCTCATTTCATGGGCTAGGCAACTTGCTCACAATGGGAAACTCTTAGATCTTGTTGATAGTTCTATTCATTCTTTGGATAGGGAACAAGCATTGCTTTGTATCACCATTGCATTGTTGTGTTTGCAGAGATCACCTGGGAAAAGGCCCTCCATGAAAGAGATTGTTGGGATGCTTTCCGGTGAGGCCGACCCACCCCATTTGCCCTTTGAATTCTCACCTTCACCACCCTCTAATTTCCCTTTCAAATCAAGAAAAAAAGCTAGGTGA 2028 0.464 MPSRPPPQPPLPSAATITAPHHYHHREMLIGGCIAAAVFLTAVLISVAIFIYRKLSHNRTTPFEQSQRRFSFSILRRASNSFSASTRLGHGGFGSVHKATLPTGETVALKVMDSPGSIQGEREFHNELSLCSNLSSPFILSLLGYSSDRSGRKLVLVYELMENRSLQDALLDRRCPELMCWLNRFDVAVSVAKGLEYLHHSCDPPVIHGDVKPSNVLLDREFRAKIGDFGLARVKSLEDSGMEMMVEEVREKKKRDVVVVEDCSSVSVVEESESVVTNTTVGFDRSPESFNVRVLDSDASPEVGVVSPEMSGVEKLSVVSDGCFDKFSIDSGNQRKRGGGCVRGGSGRDWWWKQENNGGGSESGRVKDYVMEWIGSEIKKERPKSSEWVGSGSSICSGVGDVAATAKVEGKKKQRKKLEWWASLDEEKVKGKKNRKPREWWKEEFCEELSKKSRKKKRSLDCRGESWWQRDEDVGSVAGVKKKKRKSKSSRGSIDWWLEGLSGDLRNNGRRNSQDWGNGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLDLVDSSIHSLDREQALLCITIALLCLQRSPGKRPSMKEIVGMLSGEADPPHLPFEFSPSPPSNFPFKSRKKAR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04618 675 ProSiteProfiles Protein kinase domain profile. 82 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04618 675 SMART serkin_6 82 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04618 675 Pfam Protein kinase domain 84 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04618 675 Pfam Protein kinase domain 530 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04618 675 Gene3D Transferase(Phosphotransferase) domain 1 500 651 - -
Vivi7g04618 675 Gene3D Transferase(Phosphotransferase) domain 1 161 294 - -
Vivi7g04618 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Vivi7g04618 675 Gene3D Phosphorylase Kinase; domain 1 53 160 - -
Vivi7g04618 675 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
Vivi7g04618 675 MobiDBLite consensus disorder prediction 653 675 - -
Vivi7g04618 675 MobiDBLite consensus disorder prediction 508 528 - -
Vivi7g04618 675 PANTHER OS07G0586332 PROTEIN 1 675 IPR044576 -
Vivi7g04618 675 SUPERFAMILY Protein kinase-like (PK-like) 56 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04618 Vivi-Chr7 117966139 117968497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04618 505 645 Receptor kinase-like Gene Family AT3G58690 34.899 2.12e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Vivi7g04618 Pkinase 4.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04618 - - aip:107626015 850.121