Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04596 ATGATGAAAAAGATTGATCTTCTCGAGACTTCAAAACGAAAACTCTTGGGAGAAGGTGTAGGGACTTGTTCCCTTGATGAACTACAAAGGATAGAGCAACAGTTGGAGAGGAGTATAACCAAAATTCGAGTTAAAAAGGCTGAGGTTTTCAGGGAACAAATTGATCAGCTAAAAGAAAAGGAAAAAACCCTAGTTGCTGAAAATACCAGACTCTCTGAGAAGTATGGTAGTTTTTCATCACAAAGAGCAAAAAAGGATGATAGAGAAACTATAGTTGAGATTGAAGCTTATGCAGATCAAAGTAGTCCAATTTCAGATGTGGAGACTGAGTTGTTCATTGGACTTCCAGATACAAGAACAAAACGAATTTCTCCAAACTTGAGGATTAATTAA 393 0.3664 MMKKIDLLETSKRKLLGEGVGTCSLDELQRIEQQLERSITKIRVKKAEVFREQIDQLKEKEKTLVAENTRLSEKYGSFSSQRAKKDDRETIVEIEAYADQSSPISDVETELFIGLPDTRTKRISPNLRIN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04596 130 Coils Coil 25 74 - -
Vivi7g04596 130 ProSiteProfiles K-box domain profile. 1 81 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vivi7g04596 130 Pfam K-box region 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04596 Vivi-Chr7 117387386 117388859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04596 1 125 MADS-box Gene Family AT4G22950 44.094 7.23e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04596 - - psat:127137803 172.94