Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04572 ATGGCTGAAGAAGATTCTAGAAACATTGATCTTACTCTCGGAGAACCCAAAGAGGAACCGGAAACCGAAGATGGGTCGGCGATAAAGCCTATACCGAAGGCTATTCCGGTGCAGGCGGGGTTACCTATGTCCATGCACGTGAACAAGACGTTATTCCAAGCTCAAACTCAGGCTCAATACCAAACCCAGGCCCAAGCCCAAGCCCAACTACCGGTTCAAAAAAGAGCATCCACTAAGGACCGTCACACCAAAGTAGAAGGTCGTGGCCGGAGGATTCGAATGCCTGCCACGTGTGCGGCTAGGATCTTCCAACTGACCCGAGAACTCGGACATAAATCAGACGGCGAAACAATCCGGTGGCTTCTCGAGCACGCTGAGCCCGCCATCATTGCCGCCACCGGAACCGGCACCGTCCCCGCCATAGCCATGTCCGTCAACGGAACTCTCAAAATCCCAACCACTTTCCCCAACAAAAACTCCGACCAGGAACAACAACAACAACAACAATCCGATGACTCACCAGAAAAAAAGAAACGTAAACGACCAGCGAACAGTGCTTACGTGGACATAAACGAGAGCGCCGTTTCAGTTTCAGCAGGTTTAATAACAACCTCCAACGTAAACACAAACATGAACATGAACAATAACACCGCGATAATTTCGCAACAAACTGCAATTCCGTTACCGCAAAACATGGTCCCGGTGTGGGCCATACCATCAAACGCCGTCGTTCCAACCGGAAACGCGTTCTTTGTGGTCCCAGCAAATCAGCCTCAGTTTTTCACCTTAGCTAGACCAATCTCCGGTTTCGTTTCTTCCATGGTAACACCCGTGGTCCAACTCCAACAAGCCTCCACTTTATCCATCCCATGTTCAACTTCCCCGTCATCAAAATCCCCGGCGAGAGCCACCGTCATAGCACCTAGCACCGCCGCAACAACCACCCCTCAAACGCTGAGAGACTTTTCATTGGAGATTTTCGATAGACAAGAGCTTCAGCTATTGTCGCGTTCTTCTTCCAAGCATTGA 1029 0.5044 MAEEDSRNIDLTLGEPKEEPETEDGSAIKPIPKAIPVQAGLPMSMHVNKTLFQAQTQAQYQTQAQAQAQLPVQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTFPNKNSDQEQQQQQQSDDSPEKKKRKRPANSAYVDINESAVSVSAGLITTSNVNTNMNMNNNTAIISQQTAIPLPQNMVPVWAIPSNAVVPTGNAFFVVPANQPQFFTLARPISGFVSSMVTPVVQLQQASTLSIPCSTSPSSKSPARATVIAPSTAATTTPQTLRDFSLEIFDRQELQLLSRSSSKH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04572 342 MobiDBLite consensus disorder prediction 1 26 - -
Vivi7g04572 342 MobiDBLite consensus disorder prediction 170 185 - -
Vivi7g04572 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 63 333 IPR005333 GO:0003700
Vivi7g04572 342 Pfam TCP family transcription factor 77 182 IPR017887 -
Vivi7g04572 342 MobiDBLite consensus disorder prediction 152 185 - -
Vivi7g04572 342 MobiDBLite consensus disorder prediction 152 169 - -
Vivi7g04572 342 MobiDBLite consensus disorder prediction 1 28 - -
Vivi7g04572 342 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Vivi7g04572 342 MobiDBLite consensus disorder prediction 68 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04572 Vivi-Chr7 117019726 117021237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04572 7 341 TCP Transcription Factor Family AT2G45680 47.200 8.09e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi7g04572 TCP 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04572 - - vvo:131633117 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04572 7 117019726 117021237 Vivi7g04572 7 117019726 117021237 ECH