Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04523 ATGCCTCGTGGAACACTTCATGTTAATTTGATATCTGCCAAAGGCCTAAACAACAATGATTTTCTCACCAATGTAGATCCTTATGTCATTCTCACATATCGCTCACAGGAGCACAAAAGCAGTGTGGCACAAGGTGCTGGATCCAACCCAAAGTGGAATGAGACATTTCTTTTTACAGTTTCTGATGATGTTTGTGAAATTGATATGAAATTAATGGATGAAGATGGTTTTACTCAAGATGATTTTCTTGGCAGGGCAATAATTCCTTTCCATTCAGTGTTTTATGAGGGTATCATCCCAACAGCTGTTTACAGTGTAGTTAATGACAATAAAGAATATTGTGGAGAGATTCATGTGGCTTTCACTTTTACTCCTGAGGAATGA 384 0.3776 MPRGTLHVNLISAKGLNNNDFLTNVDPYVILTYRSQEHKSSVAQGAGSNPKWNETFLFTVSDDVCEIDMKLMDEDGFTQDDFLGRAIIPFHSVFYEGIIPTAVYSVVNDNKEYCGEIHVAFTFTPEE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04523 127 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Vivi7g04523 127 SMART C2_3c 5 102 IPR000008 -
Vivi7g04523 127 PANTHER C2 DOMAIN-CONTAINING 1 125 - -
Vivi7g04523 127 Gene3D C2 domain 2 126 IPR035892 -
Vivi7g04523 127 Pfam C2 domain 4 92 IPR000008 -
Vivi7g04523 127 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04523 Vivi-Chr7 115683452 115685439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04523 4 88 C2H2 Transcription Factor Family AT4G21160 31.765 2.29e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04523 - - adu:107473142 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04523 7 115683452 115685439 Vivi7g04523 7 115683452 115685439 ECH