Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi7g04522 | ATGCCTCGTGGAACACTAGAAGTTGTTTTGATCAGTGCCAAAGGCCTTGAAGACAATGATTTTCTCTCTAGCATAGATCCTTATGTGATCCTTACTTACAGAGCACAGGAGCGCAAGAGTAATGTGCAAGAAGGTGCTGGATCCAATCCTCAATGGAATGAAACCTTTCTTTTCACTGTTTCTGATTCTGCTTCTGAGCTCACTCTTAGGGTAATGGAAAAGGACAAGTTTAGTAGTGATGATAACCTTGGAGAAGCAATAATTCCTTTAGATGCTGTGCTCGAAGAGGGTAGTATTCCAGAAAGTGTTTACAAACTTGTGAAGGAAGATGAATATTGTGGTGAGATTAAGGTGGCTCTCACTTTTACACCTGAGAGAAATCATGAACAAGGCTACAATGAAGAGGAGGAGAGCTGTGGTGGATGGAAAGAATCAGCAAGAGATTTTTGA | 450 | 0.4111 | MPRGTLEVVLISAKGLEDNDFLSSIDPYVILTYRAQERKSNVQEGAGSNPQWNETFLFTVSDSASELTLRVMEKDKFSSDDNLGEAIIPLDAVLEEGSIPESVYKLVKEDEYCGEIKVALTFTPERNHEQGYNEEEESCGGWKESARDF | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi7g04522 | 149 | PANTHER | C2 DOMAIN-CONTAINING | 1 | 136 | - | - | |
| Vivi7g04522 | 149 | Gene3D | C2 domain | 2 | 125 | IPR035892 | - | |
| Vivi7g04522 | 149 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Vivi7g04522 | 149 | Pfam | C2 domain | 4 | 102 | IPR000008 | - | |
| Vivi7g04522 | 149 | SMART | C2_3c | 5 | 102 | IPR000008 | - | |
| Vivi7g04522 | 149 | MobiDBLite | consensus disorder prediction | 128 | 149 | - | - | |
| Vivi7g04522 | 149 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 1 | 126 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi7g04522 | Vivi-Chr7 | 115676985 | 115678275 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi7g04522 | 4 | 94 | C2H2 Transcription Factor Family | AT4G21160 | 35.165 | 4.69e-11 | 57.8 |