Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04519 ATGCCTCGTGGAACTCTTGAAGTTATTTTGATCAGTGCCAAAGGCCTTGAAGACAATGATTTTCTCTCTAGCATAGATCCTTATGTGATCCTTACTTACAGAGCACAGGAGCGTAAGAGTAATGTGCAAGAAGGTGCTGGATCCAACCCTCAATGGAATGAAACCTTTCTTTTCACTGTTTCTGATTCTACTACTGAGCTCAATCTAAAGATAATGGAAAAAGACAACTATAATAATGATGATAACATTGGAGAAGTATCAATTCCTTTGGATGCACTGTTTGAAGAGGGTAGTATTCCAGAGAGTGTTTACAAACTTGTGAAAGAAGAAGAATATTGTGGTGAGATTAAGGTGGCTCTCACTTTTACACCTGAGAGAAATGATGAAGAGGGTGGTTACAATGAAGAAGAGGAGACTGGTGGATGGAAAGAATCAGCTAGTGACTTTTGA 450 0.3889 MPRGTLEVILISAKGLEDNDFLSSIDPYVILTYRAQERKSNVQEGAGSNPQWNETFLFTVSDSTTELNLKIMEKDNYNNDDNIGEVSIPLDALFEEGSIPESVYKLVKEEEYCGEIKVALTFTPERNDEEGGYNEEEETGGWKESASDF 149
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04519 149 Pfam C2 domain 4 99 IPR000008 -
Vivi7g04519 149 Gene3D C2 domain 2 125 IPR035892 -
Vivi7g04519 149 SMART C2_3c 5 102 IPR000008 -
Vivi7g04519 149 MobiDBLite consensus disorder prediction 125 149 - -
Vivi7g04519 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Vivi7g04519 149 PANTHER C2 DOMAIN-CONTAINING 1 137 - -
Vivi7g04519 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi7g04519 Vivi-Chr7 115653644 115654894 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04519 4 94 C2H2 Transcription Factor Family AT4G21160 31.868 2.06e-09 52.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04519 - - gmx:100500006 219.55