Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04472 ATGGATATAGCTTTTAGGTTTCCACAGTCGAAAGTAGGTTTCAATGGTTTCGATTCTTGTGTTTCGTTTGGTGGTAGAGGCTTTGGTTGTGCTTTTCTTTGTTATTCAAGGAATAGTTTGAAATTGGAAACTTATTGTGGAGGAGAGTTTAGAGGTTTGAATTCGAAGTCGAAGCTGAGTTCGTCGTGTAGGAGTAGTTATACTAGTAGTAACTATTTTAAGGTAAATAGGAGAGTTTGGTTAAAGTGTAAGGGAAATGATTCATTTGGATATGACAATGGAAATGGTAGGAAAGGTTTGAATGAGGGTAATGATTTGGTGTCTATTTCCGGTGCAGAATTAGGCGAACCTTTGGGGGAAGTCGGGGGTGAAGTAGAAGTAGAGGTAAAAAGTGTGGATGAATTGAAGGAATTGTTGCAGAAGGCCTTGAAAGAATTAGAAGCTGCTAGAGTGAATAGTATTGTGTTTGAGGAGAAGGTTAAAAAGATATCGGAGACTGCGATATCTTTGCAGGATGGAGCGGCGAGAGCTTGGACTGATGTTAATTCTAAACTTGATATTATTCAGGAGATTGTTAGTGAAGAGTTTATTGCTAAAGAAGCTGTTCAGAATGCGACTATGGCTCTTTCTTTAGCTGAGGCGAGACTTCAAGTGGCCGTTGAATCTTTGGAGGTTGTGAGTGAAGATAATGGTTTTGTACGAGATTCGAGCGAGAGTGATGGTGGTAACGGTGTAGTGCAAGAGGGGAAAGAGCGTTTGGTTGCTCAGGAAGATATTAAGGAATGTCAGACAAGTTTAGCGAGTTGTGAGGCTGAGCTGAGGCGCTTGCAAAGTAGGAAAGAGGAGTTGCAGAATGAAGTGAGCATGTTGCATGGAATGGCGGAAAAAGCACAGTTGAATGCGGTGAAAGCGGAGGAGGATGTTACAGACATAATGCATTTAGCCGAGCAAGCTGTTGCCTTTGAGCTTGAGGCTGCAAAGCGTGTTAACGATGCAGAAATTGCATTGCATAGAGCAGAGAAGTCTGTTATTAGTATTAATGATGATACCGCAGACGCTTTACAGGAAAAAGATGCAGCAGCCCTCCCCGAGGCGGAGAAATTGGTTCAAGATTTTCCTGGTGAAGTTTCTGTTAAAGGTGAGCTTGAAATCTCCAGTAATGACGAGTCGTTGCTGGCCACAGATTCACTAGAGACACAGTCTAATAAAACCGGCCAAATCTCGGAAGTTATAACTCAATCTGGTTATTTAAGTGATCATGATAATGGACAGTTCAGCATTGACTCTTCCAAAGAAGCTGAACTTGAAGTAGAGAAGTCAAAGAATGTAGTTCAAGCAAAAAAACAAGAAACACAGAAAGATTTGCCTAGAGATAATTCACCATCTACTCCCAAGACATCATTGAAGAAGTCTTCCCGATTTTTTCCTGCATCATTTTTCTCTTCTAGTACAGAAGAGACTGATTACTCACCAGCATCAATTTTCAATGGTCTTGTGGAATCTGCACAGAATCAATTACCCAAACTGATTGTTGGGTTATTGTTAATTGGAGCAGGGGTCACGTTCTTTTCCAATAGAGCAGAGAGAAGTTCTCAGCTACTTCAGCAGCCAGAAGTCATTGTAACCACAGTTGAAGAAGTTTCCTCAAATGCAAGGCCTCTGGTTAGACAGCTTCAGGAACTCGCCAACAGCATTAAGAAAGTTATTGCTTCGTTACCCGATCAAGAGGTGAACGACGAGGAAGCCTCCCTCTTTGACATGCTCTGGCTATTACTTGCAAGTGTAATATTCGTCCCACTATTTCAAAAAATTCCCGGAGGCAGTCCAGTTCTTGGTTACTTGGCTGCTGGAATCTTGATTGGGCCTTATGGACTCTCCATCATTCGCAATGTTCACGGGACAAAATCAATCGCTGAATTTGGAGTTGTTTTCCTTTTATTTAATATTGGCCTGGAGCTATCTGTGGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGTTGACTGCCGCAGTTATTGGGTTGGTGGCTCATTATATTTGTGGCCAAGCTGGCCCTGCTGCTCTTGTCATTGGGAATGGCCTGGCATTATCATCGACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAAGCGAGAGCACATCACGACATGGACGAGCTACATTTTCTGTATTACTTTTTCAGGATTTGGCGGTTGTTGTCTTGCTAATTCTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCTATTGCCGAAGCTCTTGGACTGGCTGCCGTTAAGGCTGCAGTTTCCATCACTGCCATAATTGCAGGTGGACGACTGCTCCTTCGACCTATATATAGGCAGATTGCAGAAAATCAGAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTGTTCTTGGGACCAGCCTTCTCACAGCCAGGGCAGGCCTGTCCATGGCTTTGGGAGCATTTTTGGCCGGTTTACTACTGGCAGAGACTGAATTTTCCTTACAGGTCGAATCCGATATTGCTCCATATCGTGGCCTTCTATTGGGACTCTTCTTTATGACGGTTGGAATGGCAATTGATCCAAAACTTCTTCTCTCAAACTTTCCAGTCATCATAGGGACACTGGGACTCTTGATATGTGGCAAGACACTCTTGGTTGCTTTGATTGGCAAAGTTTTTGGTATTTCACTCATATCTGCCATCAGAGTTGGACTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTCCTTGTTGTGGGAATTTCAATGGCCCTTACGCCATGGCTGGCCGAAGGAGGCCAGCTGATCGCCTCCCGTTTTGAGCAACACGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACGGATGATCTGCATGATCATATCATTATTTGTGGATTTGGGAGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTCATTCCCTTTGTTGCACTAGATGTGCGAAGTGATAGAGTGGCAATTGGGCGTTCCTTGGATCTCCCAGTGTACTTCGGTGATGCTGGTAGTCGAGAGGTCCTACATAAAGTTGGGGCTGGAAGGGCAAGTGCTGCAGCAGTAACTCTAGATTCCCCTGGTGCAAACTATAGAACGGTTTGGGCTCTGAGCAAACACTTCCCAAACGTGAAGACTTTTGTCCGTGCTCATGATGTTATTCACGGATTGAATTTAGAAAAAGCTGGAGCTACCGCCGTTGTACCGGAGACTTTGGAACCAAGTCTTCAGCTAGCAGCAGCCGTGCTTTCTGAGGTTAAACTTCCTGCATCAGAGATTGCGGCAACAATTAATGAATTCAGATCCCGCCATCTGGCTGAGCTTACAGAACTATCTGAAACAAGTGGAAGTTCTCTTGGATATGGATATAGTAGAATGATGAGCAAACCCAAAACCCAATCTCCCGATTCAATTGATGACTCTCAAGTCCCTGAAGGGTCAACATGA 3561 0.4361 MDIAFRFPQSKVGFNGFDSCVSFGGRGFGCAFLCYSRNSLKLETYCGGEFRGLNSKSKLSSSCRSSYTSSNYFKVNRRVWLKCKGNDSFGYDNGNGRKGLNEGNDLVSISGAELGEPLGEVGGEVEVEVKSVDELKELLQKALKELEAARVNSIVFEEKVKKISETAISLQDGAARAWTDVNSKLDIIQEIVSEEFIAKEAVQNATMALSLAEARLQVAVESLEVVSEDNGFVRDSSESDGGNGVVQEGKERLVAQEDIKECQTSLASCEAELRRLQSRKEELQNEVSMLHGMAEKAQLNAVKAEEDVTDIMHLAEQAVAFELEAAKRVNDAEIALHRAEKSVISINDDTADALQEKDAAALPEAEKLVQDFPGEVSVKGELEISSNDESLLATDSLETQSNKTGQISEVITQSGYLSDHDNGQFSIDSSKEAELEVEKSKNVVQAKKQETQKDLPRDNSPSTPKTSLKKSSRFFPASFFSSSTEETDYSPASIFNGLVESAQNQLPKLIVGLLLIGAGVTFFSNRAERSSQLLQQPEVIVTTVEEVSSNARPLVRQLQELANSIKKVIASLPDQEVNDEEASLFDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKSIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAAVIGLVAHYICGQAGPAALVIGNGLALSSTAVVLQVLQERSESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVSITAIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVVLGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMAIDPKLLLSNFPVIIGTLGLLICGKTLLVALIGKVFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAEGGQLIASRFEQHDVRSLLPVESETDDLHDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRSLDLPVYFGDAGSREVLHKVGAGRASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVIHGLNLEKAGATAVVPETLEPSLQLAAAVLSEVKLPASEIAATINEFRSRHLAELTELSETSGSSLGYGYSRMMSKPKTQSPDSIDDSQVPEGST 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04472 1186 Pfam TrkA-N domain 993 1106 IPR003148 GO:0006813
Vivi7g04472 1186 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 989 1130 IPR036291 -
Vivi7g04472 1186 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 591 871 IPR004771 GO:0006812|GO:0008324|GO:0016020
Vivi7g04472 1186 Gene3D - 989 1152 - -
Vivi7g04472 1186 FunFam K(+) efflux antiporter 2 chloroplastic 580 966 - -
Vivi7g04472 1186 FunFam K(+) efflux antiporter 2 chloroplastic 988 1152 - -
Vivi7g04472 1186 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 167 1179 - -
Vivi7g04472 1186 MobiDBLite consensus disorder prediction 436 455 - -
Vivi7g04472 1186 Coils Coil 430 450 - -
Vivi7g04472 1186 ProSiteProfiles RCK N-terminal domain profile. 992 1114 IPR003148 GO:0006813
Vivi7g04472 1186 MobiDBLite consensus disorder prediction 436 469 - -
Vivi7g04472 1186 Pfam Sodium/hydrogen exchanger family 590 960 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi7g04472 1186 Coils Coil 125 152 - -
Vivi7g04472 1186 Coils Coil 259 300 - -
Vivi7g04472 1186 Gene3D - 580 968 IPR038770 -
Vivi7g04472 1186 MobiDBLite consensus disorder prediction 1153 1186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04472 Vivi-Chr7 115263744 115273709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04472 56 1185 Inorganic Solute Cotransporters AT4G00630 69.138 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04472 K03455 - gmx:100791174 1592.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04472 7 115263744 115273709 Vivi7g04472 7 115263744 115273709 ECH
Vivi7g04472 7 115263744 115273709 Vivi7g04472 7 115263744 115273709 PCT