Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04454 ATGGAAAACACCGACCATTATGATTCCAACTACTATCGATACCGTGACAGTGGAACATCTGATTCTGAATCGGACAATGACAGTAATTCGGTGTCCAGTGCGTACCAAAGTTCAAGTGATGGCGATGGCGATGGTGATAGTCACAATGAAAAATTCCATGAATTTGATGCAGTTGTAGGTGATAGAATAGTGAAAATTGATGCCCTTAATGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATTTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGAGAAGATCGACTGGGGGTGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACGCGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACATAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAAAAGGGTAGTTATGTAGTGTCATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTATCCACTTACACCCCATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAGATTGACGGTCTACAGTCAAATGGAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACAATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTACTATTAAAGATGGTGACGTTGCTGCTGCTATAAATTATCTAAATGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGGCATGGATGGACGAATGAAGTCCCTTTTTTGGGCTGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTGATTGCGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGCTGCATTGGTGTCAGATGAAACGACAGAAACGTATAAGTGGTTGTTGGAGTGTTTTTTAGAGTGCATGGAAAATAAATACCCAGAAGCAGTTGTAACAGATGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACATCGTTTATGCGCTTGGCATTTGAACAAGAATGCGACTGAGAATGTAAAGAACTCGGAATTTTTGAAAGATTTTCAAAAAGCCATGTACTCTAATTTTACAAAGGATGAATTTGAAGAGTTTTGGTCAAAAACAATTAAAGAAAACGGACTTGAAGGAAATCCTTGGGTTCAAAAAACGTACGAGAACAGGTCACTATGGGCAACTGCATATCTACGTGAGAAGTTTTTTGCACGTATAAGAACTACGTCTCAATGTGAAGCCGTCAATGCAATCATCAAGAGTTATGTCAGGAAGAAAGGCTGCATTTTTGAATTTATGCACAATTTTGATCAGGCTATGAGATCTTATAGAAACAATGAACTGATTGCCGATTTTAAATCAATATTTTCAGAACCTGTGATGACTACTCAACTGCGTGCCCTTGAGAGCCATGCTGCGAAAGTTTATACTACAGAGATTTTCAAGGAAGTCAGAGATGAAATAGTGAAGGCTGGATCATTGATTGTTAAGGAAAGGTTAATTCGCAACGGATTTAAGACTTATCGATTTACAAAATATTGTTGTGATAACTATGACGTAGAGGTTGTGTATGATGGTGAAACACTTCAATGCGAGTGTAGGTTATGGGATTCTCGTGGGATTCCATGTTCTCATATGTTTGGTGTCATGAAGGAAGAACATGTTAGTCTCATTCCCACCGGTTTGATTTTGTCGAGGTGGACGAAGGATGCAAAAATTCAATACTTGAACATGAATTGTAATGGTTCTGATGATCCTAATATGATTGAGCTAGCTCGGTTTGGTGCATATTGTTCTGCATTTACTGTTTTTTGCAGAGAAGCTTCAAAAAAGGAAGGTGTTTATGGGGACATAATGGGTGATATTCTGATGTTACAAAAAAAGTATTGCAGTACGGACGATCCTATTTTGGCATCGAACTCAGCCGTAGGTGATCCAAATATTGTTGCGGAAAACGCGCCATCTGAACAAAATGTTGGTATGACGTCGCGGCCAGTAACTGATTCATTCAGCCAAGTTGTGAAGAACAAGAATGGAAAAAGAGGTCGCATTGGGGGAAGTAGTGTGCAAAATAAATGTACGGAACCACCGAACTCTCGTGGCGCTGATGTGACGGCGGCTTCTCGCGCGGAAGTTGGAAGCACAAGCATACCCATGCCTGCAGTGTATGGATTGCAACCCGTGTTGCCAGTGGCTACAACGACCGATGAACAATGGTGGTACTTGAACGAGCAAAGAAGTAGCTGTAATTTGACCAGGCATGAATTTGGAGGTGATTTTTATTGGATGGATGAGCAATGGGCTGAGTATTTAGGTAATTACGTTTACGATGAGGTTGAACAGAATGTCGATCTCAGTGACATTGAAAGTGATGAAGGTGAAGAAGAGATGGATGAAAATTTTGGTGATCCCGTGGTCGAAGAAAATGGCATTTCATTCAATTATCGTGTCACTGCTGCTTGTCACTTTCCATCTAATGTTGCTGACAATTGGTTATTGCCGTTGCAAACTGAGATAGACATTGTCGATGTTCATACCGATGCTATTTACCCATGTGTGTTGAAGACTGGTAGGAGGCCAGGGGAGAGATATCTTTGCTTAGGTTGGTATGAGTATGTTAAAGCAACTCGTCTGAGGGCTGGTGATGTTCTTGAGTGCACTGTGGCAGATCCTCCTACAAGAATGTTTGTTCGTTTTATGATGTAA 2883 0.4055 MENTDHYDSNYYRYRDSGTSDSESDNDSNSVSSAYQSSSDGDGDGDSHNEKFHEFDAVVGDRIVKIDALNADEIRAMEFGTVDEANLFYFKYAKCKGFAIRKSDVRRRSTGGGQTIIMRQFVCNKRGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKGSYVVSCFEEAHNHELTPSRFIHLHPIYREITAADRAQIDGLQSNGIRTCHIMGYMVAQKGGHNRVGFTKKDLYNYFDSKMRATIKDGDVAAAINYLNVKSSTDPMLYGKYAVGMDGRMKSLFWADGSSRSDYFCFGDVIAFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGAALVSDETTETYKWLLECFLECMENKYPEAVVTDGDGAMRESIKQVFPDATHRLCAWHLNKNATENVKNSEFLKDFQKAMYSNFTKDEFEEFWSKTIKENGLEGNPWVQKTYENRSLWATAYLREKFFARIRTTSQCEAVNAIIKSYVRKKGCIFEFMHNFDQAMRSYRNNELIADFKSIFSEPVMTTQLRALESHAAKVYTTEIFKEVRDEIVKAGSLIVKERLIRNGFKTYRFTKYCCDNYDVEVVYDGETLQCECRLWDSRGIPCSHMFGVMKEEHVSLIPTGLILSRWTKDAKIQYLNMNCNGSDDPNMIELARFGAYCSAFTVFCREASKKEGVYGDIMGDILMLQKKYCSTDDPILASNSAVGDPNIVAENAPSEQNVGMTSRPVTDSFSQVVKNKNGKRGRIGGSSVQNKCTEPPNSRGADVTAASRAEVGSTSIPMPAVYGLQPVLPVATTTDEQWWYLNEQRSSCNLTRHEFGGDFYWMDEQWAEYLGNYVYDEVEQNVDLSDIESDEGEEEMDENFGDPVVEENGISFNYRVTAACHFPSNVADNWLLPLQTEIDIVDVHTDAIYPCVLKTGRRPGERYLCLGWYEYVKATRLRAGDVLECTVADPPTRMFVRFMM 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04454 960 SMART 26again6 588 615 IPR006564 GO:0008270
Vivi7g04454 960 MobiDBLite consensus disorder prediction 23 42 - -
Vivi7g04454 960 MobiDBLite consensus disorder prediction 740 764 - -
Vivi7g04454 960 MobiDBLite consensus disorder prediction 1 22 - -
Vivi7g04454 960 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Vivi7g04454 960 PANTHER OS01G0519700 PROTEIN 73 639 - -
Vivi7g04454 960 MobiDBLite consensus disorder prediction 1 50 - -
Vivi7g04454 960 SUPERFAMILY DNA-binding pseudobarrel domain 881 950 IPR015300 -
Vivi7g04454 960 Pfam FAR1 DNA-binding domain 88 180 IPR004330 -
Vivi7g04454 960 MobiDBLite consensus disorder prediction 742 757 - -
Vivi7g04454 960 Pfam MULE transposase domain 302 396 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04454 Vivi-Chr7 114889721 114908312 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi7g04454 MULE 7.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04454 - - vvo:131620026 1927.14