Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04452 ATGGGAAGGACACCTTGTTGTGACAAGATGGGGTTGAAGAAAGGTCCTTGGACTAGTGAAGAGGATGAAGTTCTTGTTGGATATATCAAGAAAAATGGTGGCCATGGAAGCTGGCGTTCTCTCCCTAAGTTAGCAGGCCTTCTTCGTTGCGGTAAGAGTTGCAGACTAAGATGGACGAACTACCTGAGACCGGATATTAAACGCGGTCCCTTTAAGCCCGAGGAAGAAAAACTAGTCATACAGCTTCATGCCATCCTTGGAAATAGGTGGGCTGCAATAGCTTCTCAGTTACCAGGAAGAACAGACAACGAGATCAAGAATTTATGGAACACGCACTTAAAGAAACGTCTCATAAGCAAGGGAATCGATCCACAAACTCATGAACCAATTTCCTCATCACACTACTATCCAATTTCCAAATCAAATTCGTCTATCGCCACACGCCACATGGCTCAATGGGAAAGTGCAAGACTTGAGGCAGAAGCAAGGCTCTCAAAGGACTCACCTTTATTCAATAACAACAACACTCCTTTAGCAAGCAACAAGTCTGATTCTGACTATTTCCTTAAGATATGGAACTCTGATGTTGGACAATCTTTTCGCGGGGTTCGTAAATCAAACGAAGACGACGATGATGATAAAACTAGGTGCATAAGCTCAATGTCTCAAGAAGGGTCATCTTGTAATAACAACAAATGTGGATCTGTATCTGTTACTACTACTACTACTACAGCAACAGATTTGGCCTCATCAACTCCTGCAAGCAATGTGAAGGAAGATTTTGAATGGAGAAACTACAAATTATTTAATCATGTAGGTTGTGATGATTCATCAAGCTCTAATGATCTTGAAGACTCTTCTGACACTGCATTGCAGCTTTTGTTGGATTTTCCTTCTAACAATGACATGAGCTTCTTAGAATGA 924 0.4156 MGRTPCCDKMGLKKGPWTSEEDEVLVGYIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFKPEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLISKGIDPQTHEPISSSHYYPISKSNSSIATRHMAQWESARLEAEARLSKDSPLFNNNNTPLASNKSDSDYFLKIWNSDVGQSFRGVRKSNEDDDDDKTRCISSMSQEGSSCNNNKCGSVSVTTTTTTATDLASSTPASNVKEDFEWRNYKLFNHVGCDDSSSSNDLEDSSDTALQLLLDFPSNNDMSFLE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04452 307 MobiDBLite consensus disorder prediction 202 218 - -
Vivi7g04452 307 FunFam MYB transcription factor 70 117 - -
Vivi7g04452 307 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Vivi7g04452 307 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Vivi7g04452 307 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Vivi7g04452 307 FunFam MYB-related transcription factor 13 67 - -
Vivi7g04452 307 SMART sant 13 64 IPR001005 -
Vivi7g04452 307 SMART sant 67 115 IPR001005 -
Vivi7g04452 307 SUPERFAMILY Homeodomain-like 10 109 IPR009057 -
Vivi7g04452 307 MobiDBLite consensus disorder prediction 201 232 - -
Vivi7g04452 307 CDD SANT 16 62 IPR001005 -
Vivi7g04452 307 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Vivi7g04452 307 Gene3D - 11 68 - -
Vivi7g04452 307 CDD SANT 70 113 IPR001005 -
Vivi7g04452 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 232 - -
Vivi7g04452 307 Gene3D - 70 117 - -
Vivi7g04452 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Vivi7g04452 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04452 Vivi-Chr7 114854479 114856827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04452 1 307 MYB Transcription Factor Family AT3G61250 61.165 5.67e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi7g04452 Myb_DNA-binding 1.5e-11 CL0123