Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04442 ATGGGGATTCAATGCTCGAGATTTTTTCCTTGTTGTGTGAATTCGCAAGTTAAAGCATCTGTTCTTGAAACTCCGGATGCTGAAAATGATGATAGTGAGGTTAGTAACTGGCCTATATTCCGTGAATTTACACTTGAGCAACTTAAGAATGCGACGTCTGGTTTTGCTGTCGAGAATATCGTATCCGAGCATGGAGAGAAAGCTCCAAATGTTGTCTATAAAGGGAAGCTGGAGAATCAAATGAGAATTGCTGTAAAACGGTTTAATAGAAGTGCTTGGCCTGATACCCGACAGTTTGTGGAGGAAGCAAGAGCAGTTGGTCAGCTTCGTAACCAACGATTAGCAAACTTGCTTGGATGTTGTTGTGAAGGAGATGATAGGTTGCTTGTCGCCGAATATATGCCAAACGAAACACTTGCAAAACACCTTTTCCATTGGGAATCACAACCTATGAAATGGGCAATGCGACTTAGGGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAAGCAAAGGACGTGCTCTCTATCACGACCTTAACGCATATAGAGTTCTCTTTGACGAGGACGGTAATCCTAGGCTATCTACTTTTGGACTTATGAAAAATAGCAGGGACGGGAAAAGTTATAGCACCAATTTGGCATTTACCCCTCCCGAGTATCTCAGAACTGGGAGAGTAACACCAGAAAGCGTAATATATAGCTTTGGCACTCTTTTGCTCGACCTTCTTAGCGGAAAGCATATTCCCCCGAGTCATGCCCTTGATTTGATCCGGGACAGAAATCTTCAGATGCTGACAGATTCTTGTCTGGAAGGACAATTTTCTGATAACGATGGAACTGAGCTTGTACGCTTGGCATCTCGATGTTTACAATATGAACCTAGAGAAAGGCCTAATCCAAAATCGTTGGTGTCTGCTTTGGCTTCTCTTCAGAAAGAAACTGAGGTTCCTTCACATGTATTGATGGGTATACCACATAGCACCAGTTTCGCGTCATTATCTCCACTCGGGGAGGCATGTTCAAGAAAGGACTTGACCGCTATACATGAAGTTCTGGATAATCTTGGTTATAAAGATGATGAAGGAGTGGCAAATGAGCTATCATTCCAGATGTGGACTGATCAAATGCAGGACACATTGAATTGCAAGAAAAAGGGTGATGCCGCTTTCCGACAGAAAGAATTCAGAGAAGCGATCGAGTGCTACACACAGTTCATCGATGCTGGAACGATGGTTTCGCCAACAGTCTATGCAAGACGCAGTTTGTGTTATCTCATAAGCGACATGGCTCAGGAAGCGCTGAACGACGCAATGCAAGCACAGGTTGTTTCACCGATATGGCACATCGCATCTTATCTTCAATCAGTTTCACTTGCAACAGCTGGAATGGAGAATGAAGCACAGGCAGCACTTAAAGAAGGAACAACACTCGAATCGAAACGGAATGCAACTTCGAAACAAAAGTGA 1473 0.4358 MGIQCSRFFPCCVNSQVKASVLETPDAENDDSEVSNWPIFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRSAWPDTRQFVEEARAVGQLRNQRLANLLGCCCEGDDRLLVAEYMPNETLAKHLFHWESQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDNDGTELVRLASRCLQYEPRERPNPKSLVSALASLQKETEVPSHVLMGIPHSTSFASLSPLGEACSRKDLTAIHEVLDNLGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDAAFRQKEFREAIECYTQFIDAGTMVSPTVYARRSLCYLISDMAQEALNDAMQAQVVSPIWHIASYLQSVSLATAGMENEAQAALKEGTTLESKRNATSKQK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04442 490 FunFam probable serine/threonine-protein kinase At4g35230 30 133 - -
Vivi7g04442 490 SUPERFAMILY TPR-like 380 480 IPR011990 GO:0005515
Vivi7g04442 490 Gene3D Tetratricopeptide repeat domain 379 490 IPR011990 GO:0005515
Vivi7g04442 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 484 IPR045845 GO:0004672|GO:0009742
Vivi7g04442 490 Gene3D Phosphorylase Kinase; domain 1 29 133 - -
Vivi7g04442 490 ProSiteProfiles Protein kinase domain profile. 58 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04442 490 FunFam probable serine/threonine-protein kinase At4g35230 379 488 - -
Vivi7g04442 490 Gene3D Transferase(Phosphotransferase) domain 1 135 327 - -
Vivi7g04442 490 FunFam probable serine/threonine-protein kinase At5g41260 135 326 - -
Vivi7g04442 490 SUPERFAMILY Protein kinase-like (PK-like) 30 319 IPR011009 -
Vivi7g04442 490 Pfam Protein tyrosine and serine/threonine kinase 71 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04442 Vivi-Chr7 114643609 114647574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04442 10 312 Glycoside Hydrolase AT3G07070 33.233 6.42e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vivi7g04442 PK_Tyr_Ser-Thr 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04442 K14500 - gmx:100799260 911.753