Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04389 ATGGCATCTATCACCACCAAAGATGAAGCCTCTTCATCTTCACCATCAAAATGGACTAACCATGTTTTCTTGAGTTTCAGAGGCGAAGACACTCGCCAAGGTTTCACCGACCATCTTTTCGCTTCATTGGAAAGAAGAGGAATCAAAACATTCAAGGATGATCATGAACTTCAAAGAGGTGAAGTGATATCAGTAGAACTCAATAAAGCCATTCAAGAGTCTATGTTTGCTATCATTGTTCTCTCACCAAACTATGCCTCCTCAACATGGTGTTTGGATGAGCTACAAAAGATTGTTGAATGCAGCAAAAGTTTCGGTCAGGCTGTTTTTCCAATCTTCCACGGTGTTGATCCGTCTGATGTCAGGCATCAGAGAGGAAGCTTTGATGAAGCTTTTAGAAAACATGAAGAAAAATTCAGAAAAGATCGAAACAAAATTGAAATGTGGAGGGATTCTTTAAGAGAAATTGCTAGTTACTCTGGCTGGGACTCCAAAGGCTGGAAGGAGGCATCATTGGTGGAAACAATTGCTGAACATATTCATAAAAAATTGATTCCCAAGTTGCGTGTTTGCAAAGATAGCCTTGTTGGAATTGATTCGCGGATTGAGGAAATGTATTCGCTTCTAGGAATGAGATTAAGCAATGTTCGCTTCATAGGTATATGGGGAATGGGCGGCATAGGGAAGACAACTATTGCTAGATCAGTATATGACGCGATCAAAGGCGAATTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAATTTCTAAGACAAATGGCCTAGTTAACATCCAAAGTAAACTTCTTTCTCATCTTAAGATAAGAAGTGATGATTTTTATGACATTCATGATGGGAAAAAGATATTAGCTAACTCGTTCCGCAATAAAAAGGTTCTTCTTGTTCTTGATGATGTGAGTGAGTTAAGCCAGTTGGAGAATTTAGCTGGGAAGCAAGAATGGTTTGGTGCAGGAAGTAGAGTAATCATCACAACTCGAGATAAACACTTGTTAACGACACATGGAGTGCATGAAACTTATAAGGCTAAAGGCTTAGTGAAAAATGAAGCACTTAAGCTGTTCTGTTTGAAAGCCTTTAAACAAAACCAACCTAAAGAAGAGTATTTGAGTTTGTGTAAAGAAGTGGTTAAATATACAAAAGGTCTTCCATTAGCACTTGAAGTATTGGGTTCACATTTTCATGGAAGAACTATTGAGGTTTGGCATAGTGCTTTAGAACAAATGAGAAATGTTCCGAACTCCAAAATACATGATACATTGAGAATAAGCTACGACGGCTTACAATCTATGGAGAAAAATATGTTTCTCGATATTGCTTGTTTCTTCAAAGGAATGGACATTGATGAAGTAACAGAAATATTAGAAACTCGTGGCTATTATCCCAAAATTGGAATCGACATTTTGATCAAAAGATCATTGGTAAGTTTCGGTAGGGGGGACAGCAAAAAGTTGTGGATGCATGATTTGCTTGAAGAAATGGGAAAAAACATTGTGTGTCAAGAATCTCCGAATGATCCTGGAAAACGTAGTAGGTTATGGTCTCAAAAAGACATTGATCAAGTATTGACAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGCTATGAACTTAGTTCAACCATATGAAGCAAGCTGGAACATTGAAGCCTTTTCAAAATTAAGTCAGCTAAGATTACTCAAATTATGTGAAATAAAACTTCCTCGTGGCCTCGGTTGCTTGCCTAGTTCGCTAAAAGTTCTTGATTGGAGAGTATGTCCTTTGAAAACCCTGCCACTAACTAATCGTTTGGATGAAATTGTTAACCTCAAATTGTATCATAGCAAAATAGAACAACTTTGGCATGGAACACAGTTTCTTGAAAATCTGAAGTCCATCAATTTGAGCTTTTCGAAGTCTCTACAACGGTCGCCTGACTTTGTTGGTGTTCCAAATCTTGAATCATTGGTCCTTGAAGGTTGTACAAGCTTAACTGAGATTCATCCCTCCCTTCTACGCCACAAGAAACTTATTCTACTGAATTTGAAAGACTGCAGAAGGCTCAAAGCTCTTCCATGCAAAATAGAGATGAGTTCCTTGAAGGGTTTAACTCTTTCTGGTTGCTGTGAGTTCAAACATCTTCCAGAGTTTGACGAAAGCATGGATAATCTATTAAATCTTTGTTTAGAAGAGACCGCGATAAAAAAACTACCATCCTCACTCGGATTTCTCGTGTCCCTTATTCTCTTGGATTTAGAAAATTGCAAGAATCTCACTTGTCTTCCAGATACAATAGGTGGATTGAAGTCCCTCTTGATTCTGAATGTTTCTTGCTGCTCAAGACTCCGTAGTTTTCCAGAAGGTTTAAAGGAAATCAAATCTTTATCCGAACTTTTAGCAAATGAAACTGCCATTGAAGAACTACCTTCATCGGTTTTTTATCTAGAAAACCTCAAAGTTATATCGTTTTCTGGATGCAAAGGACCGGTTTCTAAGTCAGTGAATTCATTTTTACTACCATTTACCAGGCTGTTAAGTAGTCCACAAGAGCCTACTGGATTTCGATTGCCACCTAAGTTGTGCCTACCTTCGTTGAGGAACTTAAACTTAAGTTACTGCAATCTATCAGAAGAATCAATGCCGAAAGATTTTTCCAACTTATCTTCCTTGGTTGCTTTAGATCTCACTGGAAACAACTTTGTTAGGCCACCAAGTAGCATTTCGAAACTTCCAAAGCTTGAATATCTTAGCCTAAACTGTTGTGAAATGCTTGAGAAGTTTCCAGAGTTTCCATCAAGTATGAGGGTATTGGATGCAAGTAATTGCGCTTCATTGGAAACTTCCAAATTCAATCTATCTATGCCATGCAGTCTCTTTGCATCTCTGACACAGCGACACTCGCATTTGCCTGTAGTACTAAAGAAATATTTGGAGGCACAGGAACATGGTCTACCAAAAGACAGATTCGACATGCTTATCACAGGGTATGAAATTCCATCATGGTTCACACCTTCAAAATATGTTAAAGTTACAAATATGTCGGTCCCTCGTAATTGTCCTCCAAACGAATGGGTGGGATTCGCTTTGTGTTTCATGTTGGTAAGTTTCGATGATCAACCTGAGATATGTGATCATGAAGTGAGTTGTTACTTGTTTGGACCGAAAGGTAAGCTGTTTATCACAACCAGGGATTTGCCTCCAATGGAACCGTATGTCCGTCACCTTTATATTCTCTATCTTACAATCGATGAATGCCGCGACAGATTTTATGATGGCGGTGACTGCAGAGAAATTGAATTTGTCTTGAAAACTTACTGTTGCGATTCTTTGCAAGTTGTAGGGTGCGGTTGTCGCATTGTAAGTAAGCAAGATGTCGATGATATGTACAATAACTATTACTAG 3405 0.3836 MASITTKDEASSSSPSKWTNHVFLSFRGEDTRQGFTDHLFASLERRGIKTFKDDHELQRGEVISVELNKAIQESMFAIIVLSPNYASSTWCLDELQKIVECSKSFGQAVFPIFHGVDPSDVRHQRGSFDEAFRKHEEKFRKDRNKIEMWRDSLREIASYSGWDSKGWKEASLVETIAEHIHKKLIPKLRVCKDSLVGIDSRIEEMYSLLGMRLSNVRFIGIWGMGGIGKTTIARSVYDAIKGEFKVSCFLADIRETISKTNGLVNIQSKLLSHLKIRSDDFYDIHDGKKILANSFRNKKVLLVLDDVSELSQLENLAGKQEWFGAGSRVIITTRDKHLLTTHGVHETYKAKGLVKNEALKLFCLKAFKQNQPKEEYLSLCKEVVKYTKGLPLALEVLGSHFHGRTIEVWHSALEQMRNVPNSKIHDTLRISYDGLQSMEKNMFLDIACFFKGMDIDEVTEILETRGYYPKIGIDILIKRSLVSFGRGDSKKLWMHDLLEEMGKNIVCQESPNDPGKRSRLWSQKDIDQVLTKNKGTDKIQGIAMNLVQPYEASWNIEAFSKLSQLRLLKLCEIKLPRGLGCLPSSLKVLDWRVCPLKTLPLTNRLDEIVNLKLYHSKIEQLWHGTQFLENLKSINLSFSKSLQRSPDFVGVPNLESLVLEGCTSLTEIHPSLLRHKKLILLNLKDCRRLKALPCKIEMSSLKGLTLSGCCEFKHLPEFDESMDNLLNLCLEETAIKKLPSSLGFLVSLILLDLENCKNLTCLPDTIGGLKSLLILNVSCCSRLRSFPEGLKEIKSLSELLANETAIEELPSSVFYLENLKVISFSGCKGPVSKSVNSFLLPFTRLLSSPQEPTGFRLPPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVALDLTGNNFVRPPSSISKLPKLEYLSLNCCEMLEKFPEFPSSMRVLDASNCASLETSKFNLSMPCSLFASLTQRHSHLPVVLKKYLEAQEHGLPKDRFDMLITGYEIPSWFTPSKYVKVTNMSVPRNCPPNEWVGFALCFMLVSFDDQPEICDHEVSCYLFGPKGKLFITTRDLPPMEPYVRHLYILYLTIDECRDRFYDGGDCREIEFVLKTYCCDSLQVVGCGCRIVSKQDVDDMYNNYY 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04389 1134 Gene3D - 184 347 IPR027417 -
Vivi7g04389 1134 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 162 IPR035897 -
Vivi7g04389 1134 SUPERFAMILY "Winged helix" DNA-binding domain 422 530 IPR036390 -
Vivi7g04389 1134 Gene3D Ribonuclease Inhibitor 853 967 IPR032675 -
Vivi7g04389 1134 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Vivi7g04389 1134 SUPERFAMILY L domain-like 862 959 - -
Vivi7g04389 1134 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 717 IPR044974 GO:0006952
Vivi7g04389 1134 Gene3D - 12 183 IPR035897 -
Vivi7g04389 1134 Gene3D Ribonuclease Inhibitor 721 838 IPR032675 -
Vivi7g04389 1134 Pfam NB-ARC domain 214 432 IPR002182 GO:0043531
Vivi7g04389 1134 SUPERFAMILY L domain-like 508 828 - -
Vivi7g04389 1134 Gene3D Ribonuclease Inhibitor 552 720 IPR032675 -
Vivi7g04389 1134 SMART till_3 19 159 IPR000157 GO:0007165
Vivi7g04389 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Vivi7g04389 1134 PRINTS Disease resistance protein signature 294 308 - -
Vivi7g04389 1134 PRINTS Disease resistance protein signature 218 233 - -
Vivi7g04389 1134 PRINTS Disease resistance protein signature 743 759 - -
Vivi7g04389 1134 PRINTS Disease resistance protein signature 387 401 - -
Vivi7g04389 1134 Pfam TIR domain 21 196 IPR000157 GO:0007165
Vivi7g04389 1134 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Vivi7g04389 1134 Gene3D - 352 442 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04389 Vivi-Chr7 113832160 113836162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04389 14 824 WRKY Transcription Factor Family AT4G12020 31.846 1.45e-103 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04389 - - gmx:100815486 1577.38