Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04388 ATGGAGAAACCTTCAAAGAGTATTGTGACTTTATTTGACCAACAATTAAGTAGAGGCGAAGACACTCGCCAAGGTTTCACCGACCATCTTTTCGCTTCATTGGAAAGAAGAGGAATCAAAACATTCAAGGATGATCATGAACTTCAAAGAGGTGAAGTGATATCAGTAGAACTCAATAAAGCCATTCAAGAGTCTATGTTTGCTATCATTGTTCTCTCACCAAACTATGCCTCCTCAACATGGTGTTTGGATGAGCTACAAAAGATTGTTGAATGCAGCAAAAGTTTCGGTCAGGCTGTTTTTCCAATCTTCCACGGTGTTGATCCGTCTGATGTCAGGCATCAGAGAGGAAGCTTTGATGAAGCTTTTAGAAAACATGAAGAAAAATTCAGAAAAGATCGAAACAAAATTGAAATGTGGAGGGATTCTTTAAGAGAAATTGCTAGTTACTCTGGCTGGGACTCCAAAGGCTGGAAGGAGGCATCATTGGTGGAAACAATTGCTGAACATATTCATAAAAAATTGATTCCCAAGTTGCGTGTTTGCAAAGATAGCCTTGTTGGAATTGATTCGCGGATTGAGGAAATGTATTCGCTTCTAGGAATGAGATTAAGCAATGTTCGCTTCATAGGTATATGGGGAATGGGCGGCATAGGGAAGACAACTATTGCTAGATCAGTATATGACGCGATCAAAGGCGAATTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAATTTCTAAGACAAATGGCCTAGTTAACATCCAAAGTAAACTTCTTTCTCATCTTAAGATAAGAAGTGATGATTTTTATGACATTCATGATGGGAAAAAGATATTAGCTAACTCGTTCCGCAATAAAAAGGTTCTTCTTGTTCTTGATGATGTGAGTGAGTTAAGCCAGTTGGAGAATTTAGCTGGGAAGCAAGAATGGTTTGGTGCAGGAAGTAGAGTAATCATCACAACTCGAGATAAACACTTGTTAACGACACATGGAGTGCATGAAACTTATAAGGCTAAAGGCTTAGTGAAAAATGAAGCACTTAAGCTGTTCTGTTTGAAAGCCTTTAAACAAAACCAACCTAAAGAAGAGTATTTGAGTTTGTGTAAAGAAGTGGTTAAATATACAAAAGGTCTTCCATTAGCACTTGAAGTATTGGGTTCACATTTTCATGGAAGAACTATTGAGGTTTGGCATAGTGCTTTAGAACAAATGAGAAATGTTCCGAACTCCAAAATACATGATACATTGAGAATAAGCTACGACGGCTTACAATCTATGGAGAAAAATATGTTTCTCGATATTGCTTGTTTCTTCAAAGGAATGGACATTGATGAAGTAACAGAAATATTAGAAACTCGTGGCTATTATCCCAAAATTGGAATCGACATTTTGATCAAAAGATCATTGGTAAGTTTCGGTAGGGGGGACAGCAAAAAGTTGTGGATGCATGATTTGCTTGAAGAAATGGGAAAAAACATTGTGTGTCAAGAATCTCCGAATGATCCTGGAAAACGTAGTAGGTTATGGTCTCAAAAAGACATTGATCAAGTATTGACAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGCTATGAACTTAGTTCAACCATATGAAGCAAGCTGGAACATTGAAGCCTTTTCAAAATTAAGTCAGCTAAGATTACTCAAATTATGTGAAATAAAACTTCCTCGTGGCCTCGGTTGCTTGCCTAGTTCGCTAAAAGTTCTTGATTGGAGAGTATGTCCTTTGAAAACCCTGCCACTAACTAATCGTTTGGATGAAATTGTTAACCTCAAATTGTATCATAGCAAAATAGAACAACTTTGGCATGGAACACAGTTTCTTGAAAATCTGAAGTCCATCAATTTGAGCTTTTCGAAGTCTCTACAACGGTCGCCTGACTTTGTTGGTGTTCCAAATCTTGAATCATTGGTCCTTGAAGGTTGTACAAGCTTAACTGAGATTCATCCCTCCCTTCTACGCCACAAGAAACTTATTCTACTGAATTTGAAAGACTGCAGAAGGCTCAAAGCTCTTCCATGCAAAATAGAGATGAGTTCCTTGAAGGGTTTAACTCTTTCTGGTTGCTGTGAGTTCAAACATCTTCCAGAGTTTGACGAAAGCATGGATAATCTATTAAATCTTTGTTTAGAAGAGACCGCGATAAAAAAACTACCATCCTCACTCGGATTTCTCGTGTCCCTTATTCTCTTGGATTTAGAAAATTGCAAGAATCTCACTTGTCTTCCAGATACAATAGGTGGATTGAAGTCCCTCTTGATTCTGAATGTTTCTTGCTGCTCAAGACTCCGTAGTTTTCCAGAAGGTTTAAAGGAAATCAAATCTTTATCCGAACTTTTAGCAAATGAAACTGCCATTGAAGAACTACCTTCATCGGTTTTTTATCTAGAAAACCTCAAAGTTATATCGTTTTCTGGATGCAAAGGACCGGTTTCTAAGTCAGTGAATTCATTTTTACTACCATTTACCAGGCTGTTAAGTAGTCCACAAGAGCCTACTGGATTTCGATTGCCACCTAAGTTGTGCCTACCTTCGTTGAGGAACTTAAACTTAAGTTACTGCAATCTATCAGAAGAATCAATGCCGAAAGATTTTTCCAACTTATCTTCCTTGGTTGCTTTAGATCTCACTGGAAACAACTTTGTTAGGCCACCAAGTAGCATTTCGAAACTTCCAAAGCTTGAATATCTTAGCCTAAACTGTTGTGAAATGCTTGAGAAGTTTCCAGAGTTTCCATCAAGTATGAGGGTATTGGATGCAAGTAATTGCGCTTCATTGGAAACTTCCAAATTCAATCTATCTATGCCATGCAGTCTCTTTGCATCTCTGACACAGCGACACTCGCATTTGCCTGTAGTACTAAAGAAATATTTGGAGGCACAGGAACATGGTCTACCAAAAGACAGATTCGACATGCTTATCACAGGGTATGAAATTCCATCATGGTTCACACCTTCAAAATATGTTAAAGTTACAAATATGTCGGTCCCTCGTAATTGTCCTCCAAACGAATGGGTGGGATTCGCTTTGTGTTTCATGTTGGTAAGTTTCGATGATCAACCTGAGATATGTGATCATGAAGTGAGTTGTTACTTGTTTGGACCGAAAGGTAAGCTGTTTATCACAACCAGGGATTTGCCTCCAATGGAACCGTATGTCCGTCACCTTTATATTCTCTATCTTACAATCGATGAATGCCGCGACAGATTTTATGATGGCGGTGACTGCAGAGAAATTGAATTTGTCTTGAAAACTTACTGTTGCGATTCTTTGCAAGTTGTAGGGTGCGGTTGTCGCATTGTAAGTAAGCAAGATGTCGATGATATGTACAATAACTATTACTAG 3378 0.3822 MEKPSKSIVTLFDQQLSRGEDTRQGFTDHLFASLERRGIKTFKDDHELQRGEVISVELNKAIQESMFAIIVLSPNYASSTWCLDELQKIVECSKSFGQAVFPIFHGVDPSDVRHQRGSFDEAFRKHEEKFRKDRNKIEMWRDSLREIASYSGWDSKGWKEASLVETIAEHIHKKLIPKLRVCKDSLVGIDSRIEEMYSLLGMRLSNVRFIGIWGMGGIGKTTIARSVYDAIKGEFKVSCFLADIRETISKTNGLVNIQSKLLSHLKIRSDDFYDIHDGKKILANSFRNKKVLLVLDDVSELSQLENLAGKQEWFGAGSRVIITTRDKHLLTTHGVHETYKAKGLVKNEALKLFCLKAFKQNQPKEEYLSLCKEVVKYTKGLPLALEVLGSHFHGRTIEVWHSALEQMRNVPNSKIHDTLRISYDGLQSMEKNMFLDIACFFKGMDIDEVTEILETRGYYPKIGIDILIKRSLVSFGRGDSKKLWMHDLLEEMGKNIVCQESPNDPGKRSRLWSQKDIDQVLTKNKGTDKIQGIAMNLVQPYEASWNIEAFSKLSQLRLLKLCEIKLPRGLGCLPSSLKVLDWRVCPLKTLPLTNRLDEIVNLKLYHSKIEQLWHGTQFLENLKSINLSFSKSLQRSPDFVGVPNLESLVLEGCTSLTEIHPSLLRHKKLILLNLKDCRRLKALPCKIEMSSLKGLTLSGCCEFKHLPEFDESMDNLLNLCLEETAIKKLPSSLGFLVSLILLDLENCKNLTCLPDTIGGLKSLLILNVSCCSRLRSFPEGLKEIKSLSELLANETAIEELPSSVFYLENLKVISFSGCKGPVSKSVNSFLLPFTRLLSSPQEPTGFRLPPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVALDLTGNNFVRPPSSISKLPKLEYLSLNCCEMLEKFPEFPSSMRVLDASNCASLETSKFNLSMPCSLFASLTQRHSHLPVVLKKYLEAQEHGLPKDRFDMLITGYEIPSWFTPSKYVKVTNMSVPRNCPPNEWVGFALCFMLVSFDDQPEICDHEVSCYLFGPKGKLFITTRDLPPMEPYVRHLYILYLTIDECRDRFYDGGDCREIEFVLKTYCCDSLQVVGCGCRIVSKQDVDDMYNNYY 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04388 1125 Gene3D Ribonuclease Inhibitor 543 711 IPR032675 -
Vivi7g04388 1125 Gene3D - 343 433 IPR042197 -
Vivi7g04388 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 437 IPR027417 -
Vivi7g04388 1125 ProSiteProfiles TIR domain profile. 10 175 IPR000157 GO:0007165
Vivi7g04388 1125 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 177 - -
Vivi7g04388 1125 SUPERFAMILY "Winged helix" DNA-binding domain 413 521 IPR036390 -
Vivi7g04388 1125 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 708 IPR044974 GO:0006952
Vivi7g04388 1125 Pfam TIR domain 18 187 IPR000157 GO:0007165
Vivi7g04388 1125 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 153 IPR035897 -
Vivi7g04388 1125 Gene3D Ribonuclease Inhibitor 712 829 IPR032675 -
Vivi7g04388 1125 SMART till_3 11 150 IPR000157 GO:0007165
Vivi7g04388 1125 Gene3D Ribonuclease Inhibitor 844 958 IPR032675 -
Vivi7g04388 1125 Gene3D - 175 338 IPR027417 -
Vivi7g04388 1125 Gene3D - 17 174 IPR035897 -
Vivi7g04388 1125 Pfam NB-ARC domain 205 423 IPR002182 GO:0043531
Vivi7g04388 1125 SUPERFAMILY L domain-like 499 819 - -
Vivi7g04388 1125 SUPERFAMILY RNI-like 853 943 - -
Vivi7g04388 1125 PRINTS Disease resistance protein signature 734 750 - -
Vivi7g04388 1125 PRINTS Disease resistance protein signature 378 392 - -
Vivi7g04388 1125 PRINTS Disease resistance protein signature 285 299 - -
Vivi7g04388 1125 PRINTS Disease resistance protein signature 209 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04388 Vivi-Chr7 113832160 113836555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04388 15 815 WRKY Transcription Factor Family AT4G12020 31.746 4.38e-103 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04388 - - gmx:100815486 1554.65