Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04370 ATGGTGGATACCGGCGATTTCGCCGGCACAATCTGTTCGATCTGCTACGAATCTCTAAACCCCATCACCGAAGATCTCCAATCAGTCACCATCTGCGGCCACGTCTTTCACGAGCTCTGCTTGCAGCAATGGTTCGAGTACTGTGCGACGTCAAAGAAACGCACTTGTCCTGTTTGCAAGCAAGGTTGTAAGGTGAAAGATGCGTGTCGGCTTTATTTTCAATCGATTGGAGATGTGAAGGAAGGTGGTCTTACTCAGAAGCAGAGAGGGGTTGAGGAAGATGCTGGTGTTTTGCGAAAGGAGGTTAAGAGATTGGAGGGGAAAGTTTCGGGGCTTAGTACTGTGTTGGAGAATCAAACTAAGGAATTGGGTGAGCTTAAAGATGAGCTTTCTACTTGCAAGGAGCAGAAAATGATAGAAATAGCATCAAAGAATGAAGCCTTGAGGCAAAACGCATCCATACAAGCCCAGTTTCGTGTGAAATCAACGGAGCTTGAGAAATCAAATTTAGAGCGTTTTAGATTGCAAGAGAGAAATATGGCTTTGGCTAAAGAACTTGCAGCATTGAAATTAGTGTCTGATTTGGACCTTGGTGAAGACGAGGTTTTGAAGCTTGCCACTTTGGGTAATGGGGCCAACAGTAAAGAAACAGTAGACACTTTGAAACGATCTCTTGTTTTGCGGAACAGGAGTTACAAAGAGTTAATGGAAAAGTGTAATCTTCTTGGAAGAGGCGAGGCTCGATATAGTAAAAAGCTTGAGAAGGCTAAAGAGAAGATCAATAAAATGAAGGCAAGGGTACAAGAACTGGCGACAGCGATGGAAGTAAAAGAGAATGAATATTTGAAGCTACTAAAAGTTGCCAAGAATATTGAAAGTAAAACCAATTCTAATTCAGATGTATTGATGGCTAACAAGTTTTCTTCAAAAGAGCAGACAAAACAAAGTTCAACACCCAAGTCTGGAATGGATCTGAATAAGGACGACAACAATAAATCTTTAAAATCTTTGAAGATAGATAACTCCAAAGCTACAGAAAATAAGGATGTGGATAATGATTGTATCATTATCGATGAAAATGAATACAAAGATCATAACAAGGCTGATCTAGGAAAGCCAGAAACAGCACCTGTCTCAAAGACTAAAACATCATTGCAAGGAGTATGTAATTTGGACGAGCCTTCAAGATTTGATGTTGACATAGAAATGACTGACATTACTGCTGATATTGCCACTATGGATGAGAATGCGACATTACAAGCCAATGCTAAACAAGCTCAACCAATAGTTAACATTAGAAAGGAAACACCATTGACAACTTCAAGTTCAGTGGACATATGCTTTTCTGGTGGATTGCTTGGTCCTGATGGATCTCAACGATTCTTGGGTAAATGGTGCAAGCGTGGACAAAATGGTGAATCCACAAAAGGAAATTTGATATCTGTAGGAGCTGATGGTAGAGGTGGCACAGTCAAAGTTCTAAGGAATCCAAGCCAAGCCTCCTTGGATGGTAAGGAAAATTCGGTAGCTTTAAAAAGGTTGAAGGTTGGACCTAATAAAGCAAGTGGTATGCAATCCAGGGGGCGCCTGCAGATTGAACACTTTTTTGGGAGAGTCAATCAGTAA 1626 0.4102 MVDTGDFAGTICSICYESLNPITEDLQSVTICGHVFHELCLQQWFEYCATSKKRTCPVCKQGCKVKDACRLYFQSIGDVKEGGLTQKQRGVEEDAGVLRKEVKRLEGKVSGLSTVLENQTKELGELKDELSTCKEQKMIEIASKNEALRQNASIQAQFRVKSTELEKSNLERFRLQERNMALAKELAALKLVSDLDLGEDEVLKLATLGNGANSKETVDTLKRSLVLRNRSYKELMEKCNLLGRGEARYSKKLEKAKEKINKMKARVQELATAMEVKENEYLKLLKVAKNIESKTNSNSDVLMANKFSSKEQTKQSSTPKSGMDLNKDDNNKSLKSLKIDNSKATENKDVDNDCIIIDENEYKDHNKADLGKPETAPVSKTKTSLQGVCNLDEPSRFDVDIEMTDITADIATMDENATLQANAKQAQPIVNIRKETPLTTSSSVDICFSGGLLGPDGSQRFLGKWCKRGQNGESTKGNLISVGADGRGGTVKVLRNPSQASLDGKENSVALKRLKVGPNKASGMQSRGRLQIEHFFGRVNQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04370 541 SMART ringv_2 11 60 IPR011016 GO:0008270
Vivi7g04370 541 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 540 - -
Vivi7g04370 541 MobiDBLite consensus disorder prediction 306 324 - -
Vivi7g04370 541 MobiDBLite consensus disorder prediction 325 340 - -
Vivi7g04370 541 SMART ring_2 12 59 IPR001841 -
Vivi7g04370 541 Coils Coil 246 280 - -
Vivi7g04370 541 SUPERFAMILY RING/U-box 11 66 - -
Vivi7g04370 541 Pfam Ring finger domain 11 60 IPR001841 -
Vivi7g04370 541 MobiDBLite consensus disorder prediction 306 340 - -
Vivi7g04370 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 175 IPR013083 -
Vivi7g04370 541 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
Vivi7g04370 541 Coils Coil 109 136 - -
Vivi7g04370 541 CDD RING-H2 12 60 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04370 1 541 C3H Transcription Factor Family AT4G01270 41.860 3.97e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04370 K11985 - gmx:100812811 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04370 7 113544993 113550508 Vivi7g04370 7 113544993 113550508 ECH