Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04369 ATGGACTCAGATTGGGATCTATATGCTGTTGTCAGAGGCTGCACCACCTCAACCTCCACCACCACCTCCACCGCCACCGCCACCGCCGCCGCAACAACAACAACAACCAGTACTACTACTACTACACCTTCTTCATCTTATTTCTCTATTTACCCTGCTGAACAATCAGGCCAAGTTTTATCAATTTCAAACCCTTATGAACAATCAAGAAGTTCCGTAGAATTGCATGAACTTTGTAAACCTTTCTTCCTCAAATCACAACCTCTCTCTTCAAATTCATTCTCTTATTCATCACCATCACCAAAATCATCAGGTCAAACAAAACAACAGCTGCTTAATAATAACAAGCAGCCTCATCATAGCGGTTCTGCTACAACACCAAGATCTAAAAGAAGAAAGATTCAGCATAAGAAGGTCTGTGAAGTACAAGCTGAGAATCTTTCATCTGACATATGGGCATGGAGGAAATATGGTCAAAAACCCATCAAAGGTTCACCATATCCAAGAGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCTAGAAAACAAGTTGAGAGGAACAAATCAGATCCAACAATGTTCATAGTAACCTACACAGGTGAACACAGTCACCCTGCTCCAACTCATAGGAATTCTCTTGCCGGTTCGACGCGACAGAAGCCTTCGTCACCGCAAACTGTTACTGCTGAAGACTCTTCCCAACCCTTTACAAAACAAGTTTCTCCGTTGACATCGGAAGCTGAAGAGGAAGAGGCTACACCTTCGAAGTCGGAAAGTAGAGAAGATTTGGAAGATTTGATGAATGATGATGAGGAAAATGAATTTGAGGTATCTGATATGGTTGTAACAGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGATTTGCTGGAAAAACAGTAGCATCATCTGGTGGTGGTGACTGTTTTGGTGACCCTTTTGCAGCTAGTATTGCACTTCCTGCTTGTGGTGGCCAATAA 987 0.4195 MDSDWDLYAVVRGCTTSTSTTTSTATATAAATTTTTSTTTTTPSSSYFSIYPAEQSGQVLSISNPYEQSRSSVELHELCKPFFLKSQPLSSNSFSYSSPSPKSSGQTKQQLLNNNKQPHHSGSATTPRSKRRKIQHKKVCEVQAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPTMFIVTYTGEHSHPAPTHRNSLAGSTRQKPSSPQTVTAEDSSQPFTKQVSPLTSEAEEEEATPSKSESREDLEDLMNDDEENEFEVSDMVVTDDFFEGLDELTGFAGKTVASSGGGDCFGDPFAASIALPACGGQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04369 328 MobiDBLite consensus disorder prediction 90 124 - -
Vivi7g04369 328 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g04369 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 296 IPR044810 GO:0003700
Vivi7g04369 328 SUPERFAMILY WRKY DNA-binding domain 145 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g04369 328 FunFam WRKY transcription factor 22 132 202 - -
Vivi7g04369 328 MobiDBLite consensus disorder prediction 90 137 - -
Vivi7g04369 328 MobiDBLite consensus disorder prediction 202 277 - -
Vivi7g04369 328 ProSiteProfiles WRKY domain profile. 143 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g04369 328 Gene3D WRKY domain 132 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g04369 328 SMART WRKY_cls 148 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g04369 328 MobiDBLite consensus disorder prediction 251 265 - -
Vivi7g04369 328 MobiDBLite consensus disorder prediction 206 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04369 Vivi-Chr7 113504539 113507116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04369 1 306 WRKY Transcription Factor Family AT4G01250 47.826 9.02e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g04369 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04369 K13425 - gmx:100798084 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04369 7 113504539 113507116 Vivi1g04456 1 94940943 94942678 ECH
Vivi7g04369 7 113504539 113507116 Vivi7g04369 7 113504539 113507116 ECH
Vivi7g03805 7 103944420 103948721 Vivi7g04369 7 113504539 113507116 ECH
Vivi7g04369 7 113504539 113507116 Vivi7g04369 7 113504539 113507116 PCT