Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04335 ATGGGGAACAGTGAGGATGGAAAATCCCCTAAGACTGAAAGGCCTTCTTCACCTGTAACAACTGATGAGACCAATCAAACCAACCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATCCCACCATACTTCAACTCAGCTGTTGCTTCTGGTCATCCTCCTCACCCATATATGTGGGGACCGCCACAGCCTATGATGCATCCATATGGGCCGCCGTATGCACCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCGGTTGCCATGGGGACAAATTCACATGGCCAAGGAATTCCATCTTCACCCGCTGCTGGGACTACTGCAAGCATAGAGACACCAACCAAATCACCTGGAAATACTGATCTGGGTTTAGTAAAAAAATTGAAAGGATTTGACGGGCTTGCGATGTCAATAGGCAATGGCAATGCTGAGAGTGCTGAGCATGAAGCGGAAAACCGGCTATCTCGGAGCGTGGATACTGAGGGTTCCAATGATGGAAGTGATGGCAACACTGCAGGGACCAACAGCACAAGGAAAAGAAGCCGGGACGGAACACCAACAACCACTGATGGAGAAGGGAAAACTGTGATGCAAATTAGTCCAATTTCTAAAGAGACGGAAGCTTCCAAAAAGATGGTGCCAGTTACCCCAACCAGTGTTGCAGAAAAATTTGTTGGACCTGTACTTTCTTCATGTATGACCACAGCACTGGAGCTGAGGAACCCTTCAACTGTTCCCACTGGTGCTCCACAACCTTGTGGAGTATTGCCTCCTGAACCTTGGATGCAGAATGAACGTGAGCTGAAACGAGAGAGGAGGAAACAATCGAACCGTGAATCTGCTAGAAGATCCAGGCTGAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAGAGTTGATGCATTGACTGCTGAGAATTTGGCGCTGAAATCAGAAATAAATGAATTTGCTGAAAACTCTGAGAAACTGAAGATAGAAAATGCTACATTAAAGGAAAAGCTGAAAAACACTCAACTGGAACAGACAGAAGAGACAATTTTGAACAGCATTGACAAGAGAGCTACACCTGTAAATACAGAGAACTTACTATCCAGAGTTAATAATTCAAACTCTGGTGATAGAACTGCAGAGGAAGAGAATGGTTTCTGTGAGAACAAACCTAATTCCGGTGCAAAACTGCATCAACTACTTGATGCAAATCCTAGAGCAAATGCTGTGGCAGCTAGTTGA 1266 0.4566 MGNSEDGKSPKTERPSSPVTTDETNQTNQPNIHVYPDWAAMQAYYGQRVNIPPYFNSAVASGHPPHPYMWGPPQPMMHPYGPPYAPFYSHGGVYTHPAVAMGTNSHGQGIPSSPAAGTTASIETPTKSPGNTDLGLVKKLKGFDGLAMSIGNGNAESAEHEAENRLSRSVDTEGSNDGSDGNTAGTNSTRKRSRDGTPTTTDGEGKTVMQISPISKETEASKKMVPVTPTSVAEKFVGPVLSSCMTTALELRNPSTVPTGAPQPCGVLPPEPWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEINEFAENSEKLKIENATLKEKLKNTQLEQTEETILNSIDKRATPVNTENLLSRVNNSNSGDRTAEEENGFCENKPNSGAKLHQLLDANPRANAVAAS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04335 421 Pfam Disordered region downstream of MFMR 135 257 - -
Vivi7g04335 421 CDD bZIP_plant_GBF1 282 330 IPR045314 GO:0003700|GO:0006355
Vivi7g04335 421 MobiDBLite consensus disorder prediction 13 32 - -
Vivi7g04335 421 MobiDBLite consensus disorder prediction 154 227 - -
Vivi7g04335 421 MobiDBLite consensus disorder prediction 370 388 - -
Vivi7g04335 421 Coils Coil 290 352 - -
Vivi7g04335 421 MobiDBLite consensus disorder prediction 1 32 - -
Vivi7g04335 421 MobiDBLite consensus disorder prediction 254 303 - -
Vivi7g04335 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Vivi7g04335 421 MobiDBLite consensus disorder prediction 275 303 - -
Vivi7g04335 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Vivi7g04335 421 MobiDBLite consensus disorder prediction 109 133 - -
Vivi7g04335 421 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Vivi7g04335 421 Gene3D - 280 355 - -
Vivi7g04335 421 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi7g04335 421 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Vivi7g04335 421 Pfam bZIP transcription factor 277 339 IPR004827 GO:0003700|GO:0006355
Vivi7g04335 421 MobiDBLite consensus disorder prediction 171 217 - -
Vivi7g04335 421 MobiDBLite consensus disorder prediction 370 421 - -
Vivi7g04335 421 SUPERFAMILY Leucine zipper domain 280 336 IPR046347 GO:0003700|GO:0006355
Vivi7g04335 421 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04335 Vivi-Chr7 112996568 113002914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04335 1 420 bZIP Transcription Factor Family AT2G46270 50.353 2.35e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi7g04335 MFMR_assoc 6.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04335 K09060 - gmx:778133 628.632