Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04315 ATGGAAATTCAATTACAACCACATAAAAAGCAAGAATTTGATGCAGAAGGAGAAGAAAATAGGTTGCTACAATCTGAAGAATGTGAGACAATACCATTATCTTCGCAGCAACAACCATCTCTATCAATACCGTTAGACGGTGTTGATAGAGAGGATTGTGTATACGCGGCGAAGGACAAAATTCATATTTTTGACTTGGAGTCGAACGGTAATACCAACGGATCAACGGTGGTGCCACCGTTCTCATGGAAGAAGCTCTGGCTCTTCACAGGGCCGGGGCTTCTAATGAGCGTGGCGTTTTTGGATCCGGGTAACTTGGAAGGAGACTTACAAGCCGGTGCGATCGCAGGGTACTCGTTGCTATGGCTTTTAATGTGGTCCACCATTATGGGGCTCCTGATACAACTTCTATCTGCGAGGCTCGGTGTTGCCACGGGGCGACACTTGGCGGAGCTTTGTAGGGAGGAGTATTCCAATTGGGCTAGGCTAGTTTTGTGGTTCTTAGCTGAGTTGGCTTTGATTGCTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTCTTAAGATTCTTAGCCATGGTGTTCTTCCCATTTGGGCTGGTGTTGTAATCACAGCCTTTGATTGTTTTTTCTTTCTATTTTTGGAGAATTATGGAGTGAGGAAGTTGGAAGGTGTTTTTGCTGTTTTCATTGGAACTATGGGCTTTTCTTTTGCATGGATGTTCTTTGATACAAAGCCAAATGAAGAAGAACTTCTTATGGGTCTTTTGATCCCAAGAGTTAGCTCAAAAACACTTCGCCAAGCTGTGGAAATCGTAGGCTGCGTAATAACCCCACACAACGTATTTCTCCATTCAGCGTTAGTACAGTCAAGAGACATAGACATACGAAACAAAGGCCAAGTTCAAGAAGCTCTAAACTACTACTCAATCGAATCCTCAATTGCACTTTTAATCACATTAATAATCAACCTATTCGTAATAACAGTTTTCGCTAGAGTATTCTATGGTACAGAACAAGCCAAAGACATAGGACTAGTAAATGCAGGACAATATCTTGAAGAAAAATATGGTGGTGGATTTTTCCCAATCCTTTACATTTGGGGCATTGGTTTATTAGCAGCAGGACAAAGTAGTACAATTACAGGTACTTATGCAGGACAGTTTATCACTGAGGGATTCTTAAAATTGAACATAAAAAAATGGTTGAGGGCATTGATTACTAGAAGCTGTGCTATTGTTCCAACTATGATTGTGGCAATTGTTTTTAATACTTCAGAAGGTTCTTTGGATACTTTGAATGAATGGCTTAATGTGCTTCAAGCTATTCAAATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTGTCTAAAGAAGAGGTCATGGGCACATTCAGAATTGGACCTCTTTTAGAGAGGGTGGCATGGACAGTGGTGGTGCTTGTGATAATGCTTTATGGATATATGTTATTAGATTTCTTCCTATCTGAAGTGAAGGGACTATTGTTTGGATTTTTAGTGTTCCTTGGTGCAGCAGCATGGATTTCATTTATTGCTTTTCTTCTAAGACATAGTGGTGCTATTTCTTCTATCTTTCTCAAATCTCCGAATTCTGAAGGCTTTTCTCTTGCAAATTGA 1638 0.4035 MEIQLQPHKKQEFDAEGEENRLLQSEECETIPLSSQQQPSLSIPLDGVDREDCVYAAKDKIHIFDLESNGNTNGSTVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAELALIAADIQEVIGSAIALKILSHGVLPIWAGVVITAFDCFFFLFLENYGVRKLEGVFAVFIGTMGFSFAWMFFDTKPNEEELLMGLLIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSIALLITLIINLFVITVFARVFYGTEQAKDIGLVNAGQYLEEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEEVMGTFRIGPLLERVAWTVVVLVIMLYGYMLLDFFLSEVKGLLFGFLVFLGAAAWISFIAFLLRHSGAISSIFLKSPNSEGFSLAN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04315 545 MobiDBLite consensus disorder prediction 1 21 - -
Vivi7g04315 545 Hamap Divalent metal cation transporter MntH [mntH]. 71 494 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 165 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 269 292 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 404 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 220 241 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 376 395 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 438 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 PRINTS Natural resistance-associated macrophage protein signature 195 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 84 462 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 Pfam Natural resistance-associated macrophage protein 107 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi7g04315 545 NCBIfam Nramp family divalent metal transporter 91 460 - -
Vivi7g04315 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 78 523 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04315 Vivi-Chr7 112838258 112841160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04315 49 525 Inorganic Solute Cotransporters AT1G47240 73.585 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04315 K21398 - gmx:100801411 906.36