Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04308 ATGACAATGTGGAGTTTCTATTTCCTCTTATGCATCTTCTTCATCTTGTTAACTTCCAATACAGTTACATCCTCTTATCAACCTAGAAGATTCCTTCATCAACCTTTTGATCCACAAAACCCACTCTCACCTTCTCAACCACCTAACCCTTCACCTTCTCCCTCACCACCACCACCATCACCAAATCCTAAATATCCATTTTCCACAAATGCCCCTAATGCCTCTTCATCTTCCACACCGTTTTTCCCAACTTACCCTTCACCGCCACCGCCGCCTTCACCGTCTTCCTTCGCTTCATTTCCTGCAAATATCTCATCTCTCATCCTTCCTCAAACCCCTAAACCCAGCTCATCTTCCTCCAAACTCCTCGCTGTCGCCATTGCCTCCGTTCTCGCCGCTGTCGCCGTTCTTTCTATCTCCGCTTTTATCTACTGCCGCAGACGCCGGAGGAGATTCACCGGAGATGATAAAACACTCAGATCCGATAGTAGTATACGTTTATTCCCTCGCGATGGTGGTACCGCTGCAGTGGTAGCGAAGTCGAGAAACGTTTCGTCTACTAGCTCGGAGTTTCTTTATCTTGGTACCATTGTTAACTCTCGTGGTGATGATCTACCTGATTCTCGTGGTGCCGGTGGTGGTGGTCGTAATCCTCGGAAAATGGACTCGCCGGAGCTTCAGCCGTTACCGCCGCTTGCGCGACAAGGTTCGAGGGTTTATGACGGTGGTGCTCCGGTGGGGGAAGGTGAAGATGAGGAAGAGGAGTTTTACTCGCCGAGAGGCTCTTTGAATGGAAATGGATCGGGTTCTCGGAGAATCTTCGCCGGGATTTCAGCTGAGAATTTGGTCGGTCGAAGTAGCAATGAATCTACTTCTTCTTCGTCTTCTTATTCGTCTTCTTCTGCTTCACCGGATCGTTCTCACTCTATTAGTCTCTCGCCGCCGGTTAGTTTGAGTCCAAGAAGATCACAGTCAAAGTCGCCGGAAAATGTACTATCTCCGGCACCGACACAACAATTACGCGGCAGTGACGGTGCGAGAAGCTCGTTGTCTTCATCACGAGGTTCTTCTAACCGAAACGTGAGGTCTGCTTCTTCAATGTCATCAACGCCGGAGAAAAACTTTGCCGGAGAATGTCAGTCACCGTCTTTATCACCGCTTAACCTTTCACCGAATAGAAATTCTGATGGGCCTGTTGTTAAACTTGTAAAGACTGAATCTTGTAATGGAGATGCTTCTTCACCGAGATTATCAAATGCTTCTAGTGGTAAATCTTCGTCTTCGGCGTTTACTCTGCCGTCGCCGGAAAAAGTTACAATGATGCATCATCATAGCAATCATGGGTTGGATCAGTCTCCAACAATTTCAGATGTTTCAGATCGGTTTAGACATTCTCCTCTCTCATCATTGCCACTTTCACCGACGCTTCTTTCATCGCCGGAAAGAGAGATGAACACTCGAACACCGCCGCCGCCGCCTCCACCGACTAGGAAGCATTGGGAGATTCCAGACCTCTTAACACCAATTGCTGAATCACCAAGTGTTTTGATTCCACATGGTGTTGCACCTCAAAGGAAGCAATGGGAAATACCGGTTCTTTCAACACCAATTGCACCTTCTGTTAAAGTTTCAGCCCCACCGCCGCCACCCCCACCCCCACCGTCAATGTCGCAGCGACAACGGAAGCAATGGGAAGTACCTTCTCCAACAACTCCTGTCGGTCAACCGGTGGTTTGTAGGCCGCCGGAACTTAAACCTCCTTCAAGGCCTTTTGTGTTGCAAACACCTTCAAATACATTGGTTTCTCCTGTTGAATTGCCACCTAGTTTTGAGGAGAATGCAGAAGAGGTTTCGAAACCGAAGTTGAAGCCTTTGCATTGGGATAAAGTGAGGGCTAGTTCTGATCGTGAAATGGTTTGGGATCATTTGAGGTCCAGCTCTTTTAAGTTGAATGAAGAGATGATAGAAACATTGTTTGTGGTGAACACACCAAATTCAAAACCAAAGGATGCTACTCCACGTTCAGTTCTTGCGCCTCAAAATCACGAGGATAGGGTGTTGGATCCTAAAAAGTCTCAAAATATTGCTATCTTACTTCGAGCTGTTAACGTTACGGTAGAGGAAGTGTGTGAAGCACTCTTAGAAGGTGTTACTGATACACTTAATACCGAACTACTTGAAAGCTTGTTAAAAATGGCGCCAAGCAAGGAAGAAGAACGCAAATTGAAGGCGTATAAAGACGACACGCCAAACAAACTTGGTCCTGCTGAGAAGTTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGGTCGAAGCTTTGCTTTACATAGCCAATTTCGAGTCTGAAGTGGAGTATCTCCGGAAATCGTTTCAAACTCTAGAGGTTGCATGTGAAGAACTGCGAAACAGTAGAATGTTCTTGAAGCTACTAGAAGCTGTGCTAAAAACTGGAAACCGCATGAATGTTGGAACAAACCGAGGTGATGCACACGCGTTCAAGCTCGATACACTTCTAAAGCTGGTAGATGTCAAAGGCGCAGACGGAAAAACAACTCTTCTGCACTTTGTTGTACAAGAAATCATTAGAACCGAAGGAGCTCGTCATTCGGATACTACCACGACTAGTAGTACCAGTGTTACTAATCAAACACCAAGCACAACATTAAGCGACGACGCCAAGTGTAGGAGGCTTGGTCTTCAAGTGGTATCTAGTCTAAGTTCCGATCTAGCGAATGTTAAGAAGGCTGCAGCAATGGACTCTGAAGTTCTCACGAGCGAAGTCTCTAAGCTTTCGAAAGGAATCACGCACATCACCGAGATCGTGAAATTGAATCAAACAGCAGGATCTGAGGAAAATGTTCGTAAATTCACAGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAAGAGATTGTAAGAATTCAAGCACAAGAAAGTGTTGCATTATCACTAGTGAAAGAGATCACCGAGTATTTTCACGGAAACTTATCTAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGATTTCTTAACAGTTCTTGATAGGGTATGCAAAGAAGTTGGTAATATAAATGAAAGGACCATGATTAGTTCAGCTCATAGATTTCCTGTACCAGTGAACCCTATGCTTCCACAACCACTTCCTGGTTTACATGGAAGGAAAAATTACAGTTCCTCAGATGATGATAATCCATCTCCATAG 3222 0.4531 MTMWSFYFLLCIFFILLTSNTVTSSYQPRRFLHQPFDPQNPLSPSQPPNPSPSPSPPPPSPNPKYPFSTNAPNASSSSTPFFPTYPSPPPPPSPSSFASFPANISSLILPQTPKPSSSSSKLLAVAIASVLAAVAVLSISAFIYCRRRRRRFTGDDKTLRSDSSIRLFPRDGGTAAVVAKSRNVSSTSSEFLYLGTIVNSRGDDLPDSRGAGGGGRNPRKMDSPELQPLPPLARQGSRVYDGGAPVGEGEDEEEEFYSPRGSLNGNGSGSRRIFAGISAENLVGRSSNESTSSSSSYSSSSASPDRSHSISLSPPVSLSPRRSQSKSPENVLSPAPTQQLRGSDGARSSLSSSRGSSNRNVRSASSMSSTPEKNFAGECQSPSLSPLNLSPNRNSDGPVVKLVKTESCNGDASSPRLSNASSGKSSSSAFTLPSPEKVTMMHHHSNHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPEREMNTRTPPPPPPPTRKHWEIPDLLTPIAESPSVLIPHGVAPQRKQWEIPVLSTPIAPSVKVSAPPPPPPPPPSMSQRQRKQWEVPSPTTPVGQPVVCRPPELKPPSRPFVLQTPSNTLVSPVELPPSFEENAEEVSKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNSKPKDATPRSVLAPQNHEDRVLDPKKSQNIAILLRAVNVTVEEVCEALLEGVTDTLNTELLESLLKMAPSKEEERKLKAYKDDTPNKLGPAEKFLKAVLDVPFAFKRVEALLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTTTTSSTSVTNQTPSTTLSDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLTSEVSKLSKGITHITEIVKLNQTAGSEENVRKFTESMNKFMRMAEEEIVRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGNINERTMISSAHRFPVPVNPMLPQPLPGLHGRKNYSSSDDDNPSP 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04308 1073 PANTHER FORMIN-RELATED 12 1067 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi7g04308 1073 SUPERFAMILY Formin homology 2 domain (FH2 domain) 546 1033 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 539 577 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 284 395 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 284 432 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 203 269 - -
Vivi7g04308 1073 SMART it6_source 612 1035 IPR015425 -
Vivi7g04308 1073 Gene3D Formin, FH2 domain 609 1030 IPR042201 -
Vivi7g04308 1073 ProSiteProfiles Formin homology-2 (FH2) domain profile. 612 1046 IPR015425 -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 870 890 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 462 484 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 407 432 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 67 81 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 40 66 - -
Vivi7g04308 1073 Pfam Formin Homology 2 Domain 617 1020 IPR015425 -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 1048 1073 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 33 94 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 462 498 - -
Vivi7g04308 1073 MobiDBLite consensus disorder prediction 541 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04308 Vivi-Chr7 112543919 112548265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04308 578 1061 FH2 protein (formin) Gene Family AT3G25500 74.134 0.0 726