Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04305 ATGACTGCAAATAATGGAAGAGGAAGTGATGAACATAAGAGAAAAAGCAATGTGATTATTGGTAATGAGAATAATGGTTTGACTAGAAATTTTGCTTCTTTAGTTGGATCTGAACCTCCTAGTACTAGTTTTTGTTCCACCACAGATCCTAAACACATTGTTAGGAAGTATCATAATAGTTTTAGTAGAGAAGTTGCATTGAGAGGTGAAGAACAGATTCCTCTCAGGTTAAGCAAAAGGCAAAAGGGAAGTGATTCTAGGATAAGCTTAAATCATGAACCATGTAAAGGTTTTGCTAATTTGAATAATAGTGGTAAAATGCAAAGTGCTTCATCTATGGCTATTAATCCTCAGAAGGGAAAGGGAGTTATTCAGAAAGATTTCGATAATGTTATGTCGGGCGCGGAGTTTTTGAACGAGGGAATCGTGTTAAGAGTGTGGATGAAGTCGGAAAGTCATAGAATGAAGAAATCAGAAAGGTTGTGTATATTTAAACAGATCTTGGAGTTGGTTGATTTTGCACACTCTCAAGGGTTTGTCTTGCAAGAGATAAAACCGTCGTGTTTTACGTTGTCGCCTTCGAATAAGATTAAGTACATTGGTTTGTATAGCCAACAAGTGTTTGATGACAGACAATCATGTTTCACCGTGTTTAAGTCGTGTCTTAAGGCCATCGTGACTTGTAAAGAGACAGAAACTCTTAGGCAGCAGCAGCAGCAGCTGCTGCTGCATTTTAATGGAAGTAAGACTAAATCGGCGAACCGAACTGAATACGACACGAGCGTGTTCATGGAATCAAGGGCTAAAGAAAGGATGTGTCTAGATGGTTCGAGTTATCAGCACGATTTTGCAGAAGAAAAGCTGTTAGAAGAGAAGTGGTACACTAGTCCAGAAGTGCTCAATGATGGAGCTTGTACTTTTTCATCAAATGTTTATAGCCTAGGAGTTCTTCTCTTTGAGTTGCTGTGCAATATTGAGTCATTGGAAGCACATTCATCAGTGATGTTTGATATGCGTCATCGAATCTTACCGCCGAAATTTCTATCACAAAATGCAAAGGAAGCTGGCTTTTGTCTATGGCTTCTGCATCCCGAACCTTCTTCTCGTCCGAATTCCAGGATGATTATAGAATCTGAGTTTATATGCGAATTAGAGGAATCGAGTTCTGGAGATAATGTTATAGTATCTGAAGGCGATGTAGCTGACACTGAGGAGTTACTGAATTTTCTAGTTTCGGTTGAAGAAGAAAAGAAGAAACATGAAGCTAAATTGACAGAAGAGTTAAATTTTTTGAATGAAGATATTAAGGAGGTAGAAAGAAATCATTCATATGAGACTGATTCAGTATTTCCTTTGGCACAATTGAACTATCGAAACTTTCAAAATTCTTCCACAGATATCGGTCGATCTATTCAAAGGTCATTCCCTGACAAAGCAAGATTTATGAGTACTATAAGTCAGCTAGAGAATAGTTACTTTTCGATGAGATTCCAAGGCCTACTCAAGGAGGCTGCGGCTGTTAAAACCACCGATAAAACCGTGATGGAAAGTCGTTGGCGATTGCCTCATTTAGAGAATGTTAGTAGTAATGATCCGAAGAGAACTCAAGGCTCTATCGGTTGTCTAGGACCTTTCTTTGATGGTTTATGCAAATTTGCTCGTTACAGCAAGTTTGAAGAGCGCGGAACATTGAGAAATAGAGATCTTCTTAGTTCGGCCAATGTGATATGTGCCTTAAGTTTTGACCGTGACGAGGACTACATAGCAGCCGGTGGGATTTCGAAGAAAATAAAGATATTTGACCTCAATGCTACTTCGAGTGATTCGATAGACATTCAGTACCCCGTTGTCGAGATGTCAAACAAATCGAAGCTTAGTTGCGTGTGCTGGAACAGTTATATAAAAAACCATCTGGCTTCTACTGATTATGATGGTGTGGTTCAGATGTGGGATGCAGGCACTGGTCAGCCACTGTCTCAATACACGGAGCACCAGAAGAGAACTTGGTCTGTTCACTTTTCGGTGTCCGACCCGAAAATGTTTGCTAGTGGAAGCGACGATTGCTCGGTCAAACTGTGGAATATCAGCGAGAGAAATTCAATAGGAACCATATTGAGTCCTGCAAATGTATGTTGTGTTCAGTTCTCCGAATACTCATCAAATCTTTTGTTTTTCGGCTCGGCTGATTACAAGGTTTACGGTTACGATCTTCGTCACACTAAAGTCCCTTGGTGTACATTATCTGGTCATGGAAAAGCTGTTAGCTATGTGAAATTTATAGATGCACAAACAGTTGTGTCTGCTTCTACAGATAACACTTTGAAGCTATGGGACCTGAAGAAAACTAGCTCAGCCGAATTATCATCTGATTCTTGTGACTTAACCTTTCGAGGTCATAGTAATGAAAAGAATTTCGTTGGTTTATCCGTTTTGGACGGATACATTGCATGTGGTTCAGAATCTAATGAGGTATACTGTTATCACAAATCTCTGCCAGTGCCAATTGCTTCTCACAAATTCGAGTCAATCGATCCTATTTCTGGCCATTCAAATAGTTGCGACAACAGCGGACAATTTGTTTCGAGTGTCTGCTGGAGAAAGAAGTCTAACATGCTAGTCGCAGCCAACTCAGTTGGAATCGTGAAACTACTGCAAATGGTGTGA 2664 0.399 MTANNGRGSDEHKRKSNVIIGNENNGLTRNFASLVGSEPPSTSFCSTTDPKHIVRKYHNSFSREVALRGEEQIPLRLSKRQKGSDSRISLNHEPCKGFANLNNSGKMQSASSMAINPQKGKGVIQKDFDNVMSGAEFLNEGIVLRVWMKSESHRMKKSERLCIFKQILELVDFAHSQGFVLQEIKPSCFTLSPSNKIKYIGLYSQQVFDDRQSCFTVFKSCLKAIVTCKETETLRQQQQQLLLHFNGSKTKSANRTEYDTSVFMESRAKERMCLDGSSYQHDFAEEKLLEEKWYTSPEVLNDGACTFSSNVYSLGVLLFELLCNIESLEAHSSVMFDMRHRILPPKFLSQNAKEAGFCLWLLHPEPSSRPNSRMIIESEFICELEESSSGDNVIVSEGDVADTEELLNFLVSVEEEKKKHEAKLTEELNFLNEDIKEVERNHSYETDSVFPLAQLNYRNFQNSSTDIGRSIQRSFPDKARFMSTISQLENSYFSMRFQGLLKEAAAVKTTDKTVMESRWRLPHLENVSSNDPKRTQGSIGCLGPFFDGLCKFARYSKFEERGTLRNRDLLSSANVICALSFDRDEDYIAAGGISKKIKIFDLNATSSDSIDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDYDGVVQMWDAGTGQPLSQYTEHQKRTWSVHFSVSDPKMFASGSDDCSVKLWNISERNSIGTILSPANVCCVQFSEYSSNLLFFGSADYKVYGYDLRHTKVPWCTLSGHGKAVSYVKFIDAQTVVSASTDNTLKLWDLKKTSSAELSSDSCDLTFRGHSNEKNFVGLSVLDGYIACGSESNEVYCYHKSLPVPIASHKFESIDPISGHSNSCDNSGQFVSSVCWRKKSNMLVAANSVGIVKLLQMV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04305 887 Coils Coil 414 441 - -
Vivi7g04305 887 SMART serkin_6 29 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04305 887 MobiDBLite consensus disorder prediction 1 22 - -
Vivi7g04305 887 ProSitePatterns Trp-Asp (WD) repeats signature. 765 779 IPR019775 -
Vivi7g04305 887 Gene3D Transferase(Phosphotransferase) domain 1 142 392 - -
Vivi7g04305 887 ProSiteProfiles Trp-Asp (WD) repeats profile. 661 703 IPR001680 GO:0005515
Vivi7g04305 887 PRINTS G protein beta WD-40 repeat signature 681 695 IPR020472 -
Vivi7g04305 887 PRINTS G protein beta WD-40 repeat signature 765 779 IPR020472 -
Vivi7g04305 887 PRINTS G protein beta WD-40 repeat signature 638 652 IPR020472 -
Vivi7g04305 887 SMART WD40_4 839 885 IPR001680 GO:0005515
Vivi7g04305 887 SMART WD40_4 740 778 IPR001680 GO:0005515
Vivi7g04305 887 SMART WD40_4 612 651 IPR001680 GO:0005515
Vivi7g04305 887 SMART WD40_4 789 828 IPR001680 GO:0005515
Vivi7g04305 887 SMART WD40_4 566 601 IPR001680 GO:0005515
Vivi7g04305 887 SMART WD40_4 654 694 IPR001680 GO:0005515
Vivi7g04305 887 SMART WD40_4 697 736 IPR001680 GO:0005515
Vivi7g04305 887 PANTHER PROTEIN SPA1-RELATED 2 99 887 IPR044630 GO:0009640
Vivi7g04305 887 Pfam WD domain, G-beta repeat 746 778 IPR001680 GO:0005515
Vivi7g04305 887 Pfam WD domain, G-beta repeat 655 694 IPR001680 GO:0005515
Vivi7g04305 887 ProSiteProfiles Protein kinase domain profile. 29 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04305 887 SUPERFAMILY Protein kinase-like (PK-like) 144 384 IPR011009 -
Vivi7g04305 887 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 747 780 - -
Vivi7g04305 887 ProSiteProfiles Trp-Asp (WD) repeats profile. 747 787 IPR001680 GO:0005515
Vivi7g04305 887 Gene3D - 546 887 IPR015943 GO:0005515
Vivi7g04305 887 SUPERFAMILY WD40 repeat-like 573 884 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04305 Vivi-Chr7 112528776 112532522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04305 658 827 Miscellaneous Gene Families AT5G08390 25.581 4.66e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Vivi7g04305 WD40 0.00096 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04305 K16240 - gmx:100802144 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04305 7 112528776 112532522 Vivi7g04305 7 112528776 112532522 ECH