Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04275 ATGGAAGTGATTAAGTATGAACAAATTGGTGTCATTGGGGAACTAAGGCAAGGTGAGGAGCTAGCAAAGCAACTTTATGGTCAAATTTGCTCTTCATCTTCTTCATCAACATCATCACCATCATCATCAAGTTCATCATCACATGAAGCAAATGAAGTCTTACTTGATAAAATACTTTTGTCAATTGAGAAAGCAATCACCATGGTGAAGGATAATGTGGGAAATTTCAAGACAAAAAATGTTAACATGATTGATTCTCATTGTTCAAATGGAAGTCCTAAAAGTGAGGTTCAAGATTCAGATTTCAAGCAAAAACATGTCTCCAAGAAAAGAAAAACTATTCCTAAGTGGACAGAACAAGTGAAGGTGTATTTAGAATCAGCTTCTGAGGGGTCTATGGAGGATGGATATAGCTGGAGAAAGTATGGACAAAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGAAACGCACAAGGTTGTTTAGCTACAAAGCAAGTGCAAAAATCAGAAGCAGATCCAATGATATATGAGATAACCTACAAAGGAAGACACACATGCATCCAATCAAGTCATTTGAACAAACCACATTCATCAAAAAAGATGAAGTTTGGACAAAACAATTCACAATTACCCAATCAAAAAATTCAACCACAAGAAGAAAAAATCCAACCAACAACCCAAGAGATAATTTCCACTTTTGACAACAAAGAGGATGTGTTTCCATCATTCAATTTTTCTTCTCCTACAATAGGATATGAAAATGAAGATGACAAGATATTTTTAGAGACATTGATTGAAAACAATTTCATGGAAAATGAAGACAACAACAATATATTCTCGGAGTCAAATGTTTTTACTTTGTCACTATTGGATTTGGATAATATTGGGCTAGGCCCAAGTGAGTCTGACATGAGTGATATGATTTCAGGCCCGAATTCAGTTGTCGATTCGTCGATAGATTTAGATATCTTTGATGATATGAACTTCGACATGGATTTTTCGAGCAACATTCAAGAATTTTACTATTGA 1050 0.3486 MEVIKYEQIGVIGELRQGEELAKQLYGQICSSSSSSTSSPSSSSSSSHEANEVLLDKILLSIEKAITMVKDNVGNFKTKNVNMIDSHCSNGSPKSEVQDSDFKQKHVSKKRKTIPKWTEQVKVYLESASEGSMEDGYSWRKYGQKDILGAKFPRGYYRCTHRNAQGCLATKQVQKSEADPMIYEITYKGRHTCIQSSHLNKPHSSKKMKFGQNNSQLPNQKIQPQEEKIQPTTQEIISTFDNKEDVFPSFNFSSPTIGYENEDDKIFLETLIENNFMENEDNNNIFSESNVFTLSLLDLDNIGLGPSESDMSDMISGPNSVVDSSIDLDIFDDMNFDMDFSSNIQEFYY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04275 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 340 IPR044810 GO:0003700
Vivi7g04275 349 MobiDBLite consensus disorder prediction 85 106 - -
Vivi7g04275 349 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g04275 349 Gene3D WRKY domain 117 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g04275 349 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g04275 349 SUPERFAMILY WRKY DNA-binding domain 131 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g04275 349 FunFam WRKY transcription factor 53 119 196 - -
Vivi7g04275 349 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04275 Vivi-Chr7 111524354 111526353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04275 2 259 WRKY Transcription Factor Family AT4G23810 35.106 1.31e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g04275 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04275 - - psat:127076062 521.161