Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04262 ATGAGTCCAAAGGAAAAGAAATTTGTGAGATTTGAAGATTGGAAGTCAGAATCATCATCTTTTAATATTTCACAATATGAGTCTTCAATTGATGGATTTGAAAAAAGAAAATCTAAACCAAGTTTTAGTCCTGCGAAAAACAATGAACTGTCAGAAAAACCAGCTTCTTGGTGGAGTGTACTTGATCCACAAGGTCCACTGCTTCAAAAATGGAACAAGATCTTTGTCATAACATGTGTCATGGCAGTGTCGATGGATCCGCTGTTCTTTTACATCCCTGTGATTGATGATGAGAAAAAGTGCCTTGGTATGAGTGGAACACTGAAGATTACTGCGAGTGTTCTTCGCACGTTTTTCGATCTTTTCTACATTCTTCGGATAGTGTTTCAGTTTCGAACCGGGTTTATTATTCCTTCTTCGCGCGTGTTTGGAAGGGGCGAGCACGTTATTGATCCTCGGGCTATAGCAGTTAGATACTTGAGTTCTCATTTCATCATTGATATTCTATCAATTCTTCCACTTCCTCAGATGGTGATTTTGGCTATGATTCCAATTAGACAATGCTCAGTTCCATATATAGCAAAGGATTGGTTGAAGTATACAATAATAACACAATACGCACCGAGACTTTTACGAATCTATCCGTTGTTCAAAGAAGTAACAAGCACTTCTGGTATATTGACTGAGACAGCATGGGCTGGAGCTGCTTACAATCTTTTTCTTTATATGCTAGCAAGTCATGTGGTTGGAGCTTTTTGGTATTTGTTTTCGATAGAATCAGAGTTGCGGTGTTGGCGCAGACGATTGAAGAATACTGGATTTTCTTATAATCCCTCCTACTTGAGTTGTGACCGGGTTAATTCGACTGTTTTTTCGCTTCTCAGCAACTCTACTATTTGTCCTTTCAAAGAACCTGATGATATCATTGATCCAACAGTTTTTGATTTTGGAATATTTATAGATGGTCTAAAGTCTCGTGTCGTCAGTTCGACTACAGACTTTCATCATAAATTCTTCTACTGTTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGGCAGAACCTGAAGACAAGCACTTATATTGGGGAGATAATATTTGCAATTTTCATCGCTGTCTTTGGATTGGTTCTATTCGCATTACTTATTGGAAACATGCAGAAATATCTACAATCTACAACTGTTAGAGTTGAAGAGATGAGAATCAAAAGAAGGGATGCAGAACAATGGATGTGCCACCGTATGCTACCGGAGTACATGAAGCAAAGAATTCGACGGTATGAGCAATACAAATGGCAAGAAAATCGAGGTGTTGAAGAGGAGACGTTGATTCGCAACCTCCCTAAAGATCTCAGAAGAGACATAAAGAGACATCTTTGCTTAGATTTGCTTAAAAAAGTGCCGATTTTTGGAAACATGGATAAACAGTTGCTGGATGCAATGTGTGATAAACTCAAACCAGTCCTTTATACTGAGAAAAGTTACGTTGTTCGCGAAGGTGATCCGGTGGACGAAATGCTCTTCATCATGCGCGGAAAACTTGCGACCGCAACAACAAATGGTGGAAGGACTGGTTTCTTTAACTCGTCGGAGCTTAAGTCTGGTGATTTTTGTGGGGAGGAGCTTCTAACATGGGCATTGGATCCTACCACTTCCTCTAACTTACCTATTTCAACTAGTACTGTGGAAACTCTTTCGGAAGTTGAAGCTTTTGCTCTCATGCATGATGACTTGAAGATCGTTGCTTCTCAATTTCGCCGTCTTATTAACAGAAAACAACTCCAACACACTTTCAGGTTCTATTCATTGCAATGGAGGACGTGGGGAGCGCGGTTCATACAAGTAATATGGCGTCGATATAGAGATAAAAGGGCTCAGAAAGCATTGCGTGAAGCGGAAGAAGCACAACAAAATGCTTGTGAAAATGAGGAAGAGTGTTCACCAAGCTTTGTTTCCACCATGTATGTAGGAAAGTTTGCATCTAATGCATTAAGGAATGTAAGAAGTGGCAAAAGAGTGACAGAAACACAGACACAGACAAAGAGATTGCTACCACTCTTGCCTAAGAAACCAGCTGAGCCAGATTTCATTACTCAAAAATAG 2103 0.3985 MSPKEKKFVRFEDWKSESSSFNISQYESSIDGFEKRKSKPSFSPAKNNELSEKPASWWSVLDPQGPLLQKWNKIFVITCVMAVSMDPLFFYIPVIDDEKKCLGMSGTLKITASVLRTFFDLFYILRIVFQFRTGFIIPSSRVFGRGEHVIDPRAIAVRYLSSHFIIDILSILPLPQMVILAMIPIRQCSVPYIAKDWLKYTIITQYAPRLLRIYPLFKEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESELRCWRRRLKNTGFSYNPSYLSCDRVNSTVFSLLSNSTICPFKEPDDIIDPTVFDFGIFIDGLKSRVVSSTTDFHHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMCHRMLPEYMKQRIRRYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLDLLKKVPIFGNMDKQLLDAMCDKLKPVLYTEKSYVVREGDPVDEMLFIMRGKLATATTNGGRTGFFNSSELKSGDFCGEELLTWALDPTTSSNLPISTSTVETLSEVEAFALMHDDLKIVASQFRRLINRKQLQHTFRFYSLQWRTWGARFIQVIWRRYRDKRAQKALREAEEAQQNACENEEECSPSFVSTMYVGKFASNALRNVRSGKRVTETQTQTKRLLPLLPKKPAEPDFITQK 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04262 700 SUPERFAMILY Voltage-gated potassium channels 62 391 - -
Vivi7g04262 700 SMART cnmp_10 469 600 IPR000595 -
Vivi7g04262 700 Gene3D - 73 393 - -
Vivi7g04262 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 696 - -
Vivi7g04262 700 CDD CAP_ED 469 601 IPR000595 -
Vivi7g04262 700 Gene3D Helix hairpin bin 396 460 - -
Vivi7g04262 700 Gene3D Jelly Rolls 467 587 IPR014710 -
Vivi7g04262 700 MobiDBLite consensus disorder prediction 30 49 - -
Vivi7g04262 700 Pfam Ion transport protein 71 397 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi7g04262 700 ProSiteProfiles cAMP/cGMP binding motif profile. 469 553 IPR000595 -
Vivi7g04262 700 FunFam Cyclic nucleotide-gated ion channel 1 396 460 - -
Vivi7g04262 700 Pfam Cyclic nucleotide-binding domain 489 579 IPR000595 -
Vivi7g04262 700 SUPERFAMILY cAMP-binding domain-like 398 587 IPR018490 -
Vivi7g04262 700 FunFam Cyclic nucleotide-gated ion channel 1 467 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04262 Vivi-Chr7 111204491 111208142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04262 9 696 Ion Channels AT4G01010 61.213 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04262 K05391 - gmx:100795201 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04262 7 111204491 111208142 Vivi7g04262 7 111204491 111208142 ECH