Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04234 ATGGAAGGGATAGGTCCTAATTCATGTCCAAGGCAAGGGTTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACCAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGGAAGAACAAGAAAGTTCCTTCTTCTTCATCATTAGCCACACCTAATAATAATCACTCACCAAAAATTCCTGACCTAAATCCACCAACCCTTCAAGTCTCACATCTTTCATCTCAAAACCCTAAAATGCATGGAGGCCAAGATCTTAACCTAGCTTTTTCATCTATGGAAAACTATCATCATCATCATCCTCATCATCATAATCCTCATGGTATGTCATCATCATATATTGAGATGCATAACAATAATGAGTCATCATCTTCTTCAGCTCTTGACCTACTTAGGTCTAGCATGGCATCTAGAGGCATAAACCCTTATGCTAATAATAATAATATTTCTTTGATGCCAAACTCAAATGCTATTTACCCTTCTGGATTTCCCATGCAAGAAGTTAAACCTAGTCTTGGATTTTCAATTGATGGAATGAATGGAAATAGATCATATGACCATCATGTTCAAGTTCAAGAAGGTGGCGGCGGCGATGGTGGTGGTGGAAGACTTTTGTTCCCTTTTGGAGAGGTTAATAAACAGATTCCTACAAGTGGTGTTGAAGTGGAACATAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATTGGTGAAGGATCATGGTAA 846 0.3806 MEGIGPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVPSSSSLATPNNNHSPKIPDLNPPTLQVSHLSSQNPKMHGGQDLNLAFSSMENYHHHHPHHHNPHGMSSSYIEMHNNNESSSSSALDLLRSSMASRGINPYANNNNISLMPNSNAIYPSGFPMQEVKPSLGFSIDGMNGNRSYDHHVQVQEGGGGDGGGGRLLFPFGEVNKQIPTSGVEVEHNKDQQGNSTGYWNGMIGEGSW 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04234 281 MobiDBLite consensus disorder prediction 260 281 - -
Vivi7g04234 281 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Vivi7g04234 281 MobiDBLite consensus disorder prediction 260 275 - -
Vivi7g04234 281 MobiDBLite consensus disorder prediction 1 22 - -
Vivi7g04234 281 MobiDBLite consensus disorder prediction 65 163 - -
Vivi7g04234 281 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Vivi7g04234 281 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Vivi7g04234 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 168 IPR045174 GO:0003700|GO:0006355
Vivi7g04234 281 MobiDBLite consensus disorder prediction 76 118 - -
Vivi7g04234 281 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04234 Vivi-Chr7 110574802 110577018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04234 16 281 C2C2-Dof Transcription Factor Family AT3G61850 49.306 2.47e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi7g04234 zf-Dof 4.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04234 - - gmx:778110 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04234 7 110574802 110577018 Vivi7g04234 7 110574802 110577018 ECH
Vivi6g05296 6 157722892 157724502 Vivi7g04234 7 110574802 110577018 PCT