Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04232 ATGAATTCTGGGTCTGTTCCTCCCTCTGATAATCATCATTTTAGAACAAGGGAGCTTCTTGATTTTGAGGAGGATTTTGTAGAGAAAGATCCAACCGGCAGGTACATAAGGTACAATGAAATCTTGGGCAGGGGTGCCTTCAAGACTGTTTATAGGGCATTTGATGAAGTTGATGGGATAGAAGTTGCATGGAACCAAGTTAGGATTGATGGCCTCTTACATTCACCAGATGATCTTGCGAAATTGTATTCCGAAGTTCACCTATTGAAGGCCTTAAAACATGAAAACATCATTAAGTTCTACGATTCCTGGATCAATGATAAGCAGAAAACCGTTAACATGATCACCGAACTCTTCACATCTGGAAACTTAAGACAGTATCGTAAGAAGCATAAATACGTTGAAATGAAAGCTATAAAATGTTGGGCCAGACAGATTCTTCAAGGCCTAGCATATCTTCACGGTCACAAGCCGCCTATTATTCACCGAGACTTGAAATGCGACAACATTTTTGTGAATGGACACCAAGGAGAGGTTAAGATAGGTGATCTCGGTTTGGCAATCGTCATGCAGCAGCCAACTGCCCGGAGTGTTATTGGGACGCCCGAGTTTATGGCTCCCGAATTATACGAAGAGGAGTACAATGAACTCGTGGACATCTATTCTTTTGGGATGTCAATGTTGGAGATGGTTACTCTCGAGTATCCCTATAATGAATGCACCAACCCAGCTCAAATATTTAAGAAAGTTACTTCGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGACCCCGAAATTAAGGAGTTTATCGAGAAATGCCTGGTTCCCGCGTCTGAGAGATTGTCTGCGGAGGAGCTTCTTAAAGATCCATTTTTACAAATTGAGAGTCCAAAGGATCCATTCCTGCCGTCTATTAAAACTCCAAGAGCTACAGATATTCCCAAGTCTCGTTCTCCGTCTATGGACATCGATAATGACTACAAACAGTTTTCCGAGAGTATCTACGCTGAAAGCAACCAGGAAGTCTTACATTATCCTGTTTTTGAAGTCCAGAGGACTAATAAGAATAATGAGTTTACGTTAAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGGTCGAATAAGGAATATACATTTTCTCTTTTACCTCGATACAGATACTGCCGTCTCCGTGGCCTCAGAGATGGTTGAACATTTGGAGCTGGCGGATCATGATGTGGTTTTCATAGCCGGCCTTATTGATTACTTGATAATGAAGCTTCTTTCTTGGATGAAACCGTCGCACGATCATAACTCAGATCATAACTCAGCTGGAGAAATAAGTCTTTATAGTGGTTCTACAAATGTCGATAGCCAAATCTCAATGGCATGCCCTTGGGGTTCTACCCGAACTAGTGTTCCCTCCGATACAGTTAGCGGTCAAGACGGCTTTTCCGGGTTTAATATAATGCCTAGAGAAGGTTTTGAGACAGCTGGAAAGAGCTGTTCTTACAAAACTGCCGATAACATTGCTTTCGAGGGTGTCTTTGATTCGTCGCCTAGTTTGACTAGTTTGATTGACTCGGAAGATGGATCAGGAACTTCTGATATAACTGTTGATGACGCTTCGATGAAAAATGACAGTTGTCATGATTCCAAATATCTCGGGGTTGGATGTTTTAAATGCTTTAGAAGGCCGATAACCGAGCTTGAAGCCGGGGAGACGTATTTTGAAGACTGTAAATCGCAGGCAGCAGATTACAATGTTAATAAAAGGACTGCAAACACGGGATCATCGAATATCAGGAGCCTGTTAAGTAGCTGCTGCTTTTCTATGCCTTGCACCGAAGAGGATATTGATCTTAAGTTAAAGCTCGAACTTGACGCGATTGAGTCGCAATATCAGCAATGGATTGAGGAACTCACTAGAATGAAACTGGAGGCAACGGAAGCAACCAAAAAGAGATGGATGGCCAAGAAAAAGTACTAA 2001 0.4203 MNSGSVPPSDNHHFRTRELLDFEEDFVEKDPTGRYIRYNEILGRGAFKTVYRAFDEVDGIEVAWNQVRIDGLLHSPDDLAKLYSEVHLLKALKHENIIKFYDSWINDKQKTVNMITELFTSGNLRQYRKKHKYVEMKAIKCWARQILQGLAYLHGHKPPIIHRDLKCDNIFVNGHQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMSMLEMVTLEYPYNECTNPAQIFKKVTSGIKPASLNKVSDPEIKEFIEKCLVPASERLSAEELLKDPFLQIESPKDPFLPSIKTPRATDIPKSRSPSMDIDNDYKQFSESIYAESNQEVLHYPVFEVQRTNKNNEFTLKGTKNDDNSVSLTLRIADTCGRIRNIHFLFYLDTDTAVSVASEMVEHLELADHDVVFIAGLIDYLIMKLLSWMKPSHDHNSDHNSAGEISLYSGSTNVDSQISMACPWGSTRTSVPSDTVSGQDGFSGFNIMPREGFETAGKSCSYKTADNIAFEGVFDSSPSLTSLIDSEDGSGTSDITVDDASMKNDSCHDSKYLGVGCFKCFRRPITELEAGETYFEDCKSQAADYNVNKRTANTGSSNIRSLLSSCCFSMPCTEEDIDLKLKLELDAIESQYQQWIEELTRMKLEATEATKKRWMAKKKY 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04232 666 SMART serkin_6 36 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04232 666 Gene3D Phosphorylase Kinase; domain 1 20 117 - -
Vivi7g04232 666 FunFam Probable serine/threonine-protein kinase WNK1 21 117 - -
Vivi7g04232 666 MobiDBLite consensus disorder prediction 300 323 - -
Vivi7g04232 666 Pfam Protein kinase domain 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04232 666 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 373 427 IPR024678 GO:0004674|GO:0005524
Vivi7g04232 666 SUPERFAMILY Protein kinase-like (PK-like) 38 341 IPR011009 -
Vivi7g04232 666 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 479 - -
Vivi7g04232 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Vivi7g04232 666 FunFam probable serine/threonine-protein kinase WNK9 119 298 - -
Vivi7g04232 666 Coils Coil 631 658 - -
Vivi7g04232 666 CDD STKc_WNK 34 293 - -
Vivi7g04232 666 ProSiteProfiles Protein kinase domain profile. 36 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04232 666 Gene3D - 370 452 - -
Vivi7g04232 666 Gene3D Transferase(Phosphotransferase) domain 1 119 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04232 Vivi-Chr7 110505277 110509022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04232 23 455 MAP Kinase Kinase Kinase AT5G41990 60.356 9.17e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi7g04232 Pkinase 6.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04232 K08867 - gmx:100272197 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04232 7 110505277 110509022 Vivi7g04232 7 110505277 110509022 ECH