Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04231 ATGATCACCGAACTCTTCACATCTGGAAACTTAAGACAGTATCGTAAGAAGCATAAATACGTTGAAATGAAAGCTATAAAATGTTGGGCCAGACAGATTCTTCAAGGCCTAGCATATCTTCACGGTCACAAGCCGCCTATTATTCACCGAGACTTGAAATGCGACAACATTTTTGTGAATGGACACCAAGGAGAGGTTAAGATAGGTGATCTCGGTTTGGCAATCGTCATGCAGCAGCCAACTGCCCGGAGTGTTATTGGGACGCCCGAGTTTATGGCTCCCGAATTATACGAAGAGGAGTACAATGAACTCGTGGACATCTATTCTTTTGGGATGTCAATGTTGGAGATGGTTACTCTCGAGTATCCCTATAATGAATGCACCAACCCAGCTCAAATATTTAAGAAAGTTACTTCGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGACCCCGAAATTAAGGAGTTTATCGAGAAATGCCTGGTTCCCGCGTCTGAGAGATTGTCTGCGGAGGAGCTTCTTAAAGATCCATTTTTACAAATTGAGAGTCCAAAGGATCCATTCCTGCCGTCTATTAAAACTCCAAGAGCTACAGATATTCCCAAGTCTCGTTCTCCGTCTATGGACATCGATAATGACTACAAACAGTTTTCCGAGAGTATCTACGCTGAAAGCAACCAGGAAGTCTTACATTATCCTGTTTTTGAAGTCCAGAGGACTAATAAGAATAATGAGTTTACGTTAAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGGTCGAATAAGGAATATACATTTTCTCTTTTACCTCGATACAGATACTGCCGTCTCCGTGGCCTCAGAGATGGTTGAACATTTGGAGCTGGCGGATCATGATGTGGTTTTCATAGCCGGCCTTATTGATTACTTGATAATGAAGCTTCTTTCTTGGATGAAACCGTCGCACGATCATAACTCAGATCATAACTCAGCTGGAGAAATAAGTCTTTATAGTGGTTCTACAAATGTCGATAGCCAAATCTCAATGGCATGCCCTTGGGGTTCTACCCGAACTAGTGTTCCCTCCGATACAGTTAGCGGTCAAGACGGCTTTTCCGGGTTTAATATAATGCCTAGAGAAGGTTTTGAGACAGCTGGAAAGAGCTGTTCTTACAAAACTGCCGATAACATTGCTTTCGAGGGTGTCTTTGATTCGTCGCCTAGTTTGACTAGTTTGATTGACTCGGAAGATGGATCAGGAACTTCTGATATAACTGTTGATGACGCTTCGATGAAAAATGACAGTTGTCATGATTCCAAATATCTCGGGGTTGGATGTTTTAAATGCTTTAGAAGGCCGATAACCGAGCTTGAAGCCGGGGAGACGTATTTTGAAGACTGTAAATCGCAGGCAGCAGATTACAATGTTAATAAAAGGACTGCAAACACGGGATCATCGAATATCAGGAGCCTGTTAAGTAGCTGCTGCTTTTCTATGCCTTGCACCGAAGAGGATATTGATCTTAAGTTAAAGCTCGAACTTGACGCGATTGAGTCGCAATATCAGCAATGGATTGAGGAACTCACTAGAATGAAACTGGAGGCAACGGAAGCAACCAAAAAGAGATGGATGGCCAAGAAAAAGTACTAA 1662 0.4242 MITELFTSGNLRQYRKKHKYVEMKAIKCWARQILQGLAYLHGHKPPIIHRDLKCDNIFVNGHQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMSMLEMVTLEYPYNECTNPAQIFKKVTSGIKPASLNKVSDPEIKEFIEKCLVPASERLSAEELLKDPFLQIESPKDPFLPSIKTPRATDIPKSRSPSMDIDNDYKQFSESIYAESNQEVLHYPVFEVQRTNKNNEFTLKGTKNDDNSVSLTLRIADTCGRIRNIHFLFYLDTDTAVSVASEMVEHLELADHDVVFIAGLIDYLIMKLLSWMKPSHDHNSDHNSAGEISLYSGSTNVDSQISMACPWGSTRTSVPSDTVSGQDGFSGFNIMPREGFETAGKSCSYKTADNIAFEGVFDSSPSLTSLIDSEDGSGTSDITVDDASMKNDSCHDSKYLGVGCFKCFRRPITELEAGETYFEDCKSQAADYNVNKRTANTGSSNIRSLLSSCCFSMPCTEEDIDLKLKLELDAIESQYQQWIEELTRMKLEATEATKKRWMAKKKY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04231 553 Coils Coil 518 545 - -
Vivi7g04231 553 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 260 314 IPR024678 GO:0004674|GO:0005524
Vivi7g04231 553 SUPERFAMILY Protein kinase-like (PK-like) 1 228 IPR011009 -
Vivi7g04231 553 Pfam Protein kinase domain 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04231 553 FunFam probable serine/threonine-protein kinase WNK9 6 185 - -
Vivi7g04231 553 Gene3D - 257 339 - -
Vivi7g04231 553 MobiDBLite consensus disorder prediction 187 210 - -
Vivi7g04231 553 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 368 - -
Vivi7g04231 553 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04231 553 Gene3D Transferase(Phosphotransferase) domain 1 6 185 - -
Vivi7g04231 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Vivi7g04231 553 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04231 Vivi-Chr7 110505277 110509022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04231 1 342 MAP Kinase Kinase Kinase AT5G41990 57.821 4.04e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi7g04231 Pkinase 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04231 K08867 - gmx:100272197 706.827