Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04223 ATGTTGGAGTCAGACACTGACTTATCTGTGGTGAATTATATGCTCATGAAAGTTCCAATGGAGGAAAAGCCGTTTCCGGCATGGTCATGGTCAGTTGAGGAGTGTTTGAAAGAGTATGGTGTGAAACTGGAAAAGGGTTTGAGTTCTAATGAGGTTCAGAAGCGGCGTGAGAAATACGGTTGGAACGAGCTAGCGAAAGAGAAGGGAAAGCCGTTATGGAAACTAGTGTTGGAACAATTCGACGATATGTTGGTGAAGATACTTTTGGTTGCAGCGTTTGTATCGTTTCTTTTGGCGTACATTCAAGGAAGTGAATCGGGGGAGTCTGGATTCGAAGCTTACGTAGAGCCGCTCGTGATCATTTTGATCTTAGTCCTTAACGCGATTGTCGGAGTTTGGCAAGAGAATAACGCTGAAAAGGCTCTTGAAGCTCTTAAAGAGTTGCAATGTGAGTCTATAAAAGTGTTGAGGGATGGATATTCTGTTCCTGATTTGCCTGCGCGAGAGCTTGTTCCGGGCGATATTGTTGAGCTGCGTGTTGGAGATAAAGTTCCTGCGGATATGAGAGTTGCAGCTTTGAAAACATCGACATTGAGATTGGAGCAAAGCTCGTTAACCGGAGAAGCAATGCCGGTCCTCAAAGGCACAAATCCGATTTTCTTGGATGATTGCGAATTGCAGGCCAAAGAGAATATGGTATTTGCTGGCACGACCGTTGTCAACGGAAGCTGTGTTTGCATTGTTATTACCACTGCAATGAACACCGAAATCGGGAAAATACAGAAACAAATACACGAAGCTTCGTTGGAGGAGAGTGATACTCCGTTGAAGAAAAAGTTAGACGAATTCGGTAGCAGGCTAACAACTTCCATTGGAATAGTTTGTCTTGTTGTATGGATCATAAACTACAAAAATTTCATTTCTTGGGATGTTGTTGATGGATGGCCTACAAATATTCAATTTTCTTTTCAGAAATGCACTTACTATTTCAAAATCGCTGTAGCTCTTGCCGTTGCTGCAATACCAGAAGGTCTTCCAGCTGTTATCACAACATGTTTAGCGCTCGGTACAAGGAAAATGGCACAAAAGAATGCGATTGTTCGAAAGCTTCCAAGCGTTGAAACTTTGGGATGTACCACTGTGATTTGTTCGGATAAAACTGGCACGCTGACTACAAATCAAATGTCTGTGATGGAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTAGAGTCCTTAGAGTTGAAGGGACAACTTACGATCCACAAGACGGAGGCATTGTTGATTGGACTTGCTATAATATGGACGCGAATTTGTTAGCCATTGCAGAAATATGCGCTGTTTGTAATGATGCTGGTGTTTATTTTGACGGTCGCTTATTTCGAGCCACGGGTTTGCCAACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGGTTTCCAGATATCAAGTCAAGGAACAAAACTCGCGACATGCAAGGTGCAGCAAACAACACGATGGATGACACCTTGAAGTTAGGCTGTAGTGAGTGGTGGAATAGAAGATCCAAACGCGTAGCCACATTGGAGTTTGACCGTGTTAGAAAGTCAATGAGTGTTATTGTTCGTGAGCCAGATGGTCAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTATTGGAGCGAAGTTCGTTTGTGCAACTTGCGGATGGATCTCTTGTTCCAATAGATGATCAATGTAGGGAGCTACTTCTTCAAAGACTCCACGAGATGAGTTCGAAGGGATTGCGTTGCTTGGGTTTGGCATGTAAAGACGAGTTGGGAGAATTTTCAGATTATTATGCAGACACTCATCCTGCACACAAGAAATTGCTTGATCCGACATACTATTCATCCATTGAGAGTGATTTAGTTTTTGTCGGCGTTGTTGGTTTACGAGACCCTCCTAGAGAGGAAGTTCATAAAGCAATTGAGGATTGCAAGCAAGCTGGTATTCGAGTTATGGTAATAACCGGAGATAATAAGTCAACAGCCGAGGCTATTTGTAAGGAAATCGGACTTTTCTCTAGAGATGAAGATCTTACAGGTCAAAGTTTGACAGGTAAAGAATTCACGTCTCTTTCTCATTCAGAACAAGTTAAATTACTGTTGAGAAATGGAGGCAAGGTTTTTTCGCGAGCCGAGCCTAGACACAAGCAAGAAATTGTGAGACTATTGAAGGAAATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCCGCACTTAAGCTTGCTGACATAGGGATTGCTATGGGAATAACTGGAACCGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAATTTTAGTACTATTGTTTCAGCTATCGCTGAGGGTCGAGCTATTTATAATAACATGAAAGCGTTTATAAGGTACATGATATCGTCAAATGTCGGGGAAGTGATATCGATATTCTTGGCAGCTGCTTTGGGGATCCCAGAATGCATGATACCAGTACAACTTCTGTGGGTGAATTTGGTCACTGATGGTCCACCTGCAACCGCTCTTGGTTTCAACCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGAAAAAGCGACGATGCTCTTATAAGTACTTGGGTTCTTTTTCGTTACCTAATAATTGGTTCCTATGTCGGAATTGCAACGGTTGGTATTTTTGTCTTGTGGTACACTCAAGCATCTCTTTTCGGCATCAATCTTGTTAGTGATGGACACACAATTATAGAATTGTCACAGCTTCTCAACTGGAGGGAATGTCCTTCATGGTCTAACTTCACCGTTTCTTCATTTGACGCTGGTGGTGGTCGCTTGATCGCGTTTTCAAATCCTTGTGACTATTTTTCAGTTGGCAAAGTAAAGGCAATGACACTTTCTCTCTCTGTCTTGGTGGCAATTGAGATGTTTAATTCTTTGAATGCTCTATCAGAAGAGAATAGCTTGAGGACATTACCACCTTGGAGGAATCCTTGGCTTTTGGTAGCCATGACATTATCTTTAGGACTACATTGCGTCATACTTTACATTCCATTCCTCTCTGAAGTGTTTGGTGTTACTCCATTAAGTTTGAAGGAGTGGTTTTTGGTGATTCTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTTGTGGTGAGGAGTCAAAGGAAGAAGACAAAAGAGAAAGAAGCATGA 3207 0.4234 MLESDTDLSVVNYMLMKVPMEEKPFPAWSWSVEECLKEYGVKLEKGLSSNEVQKRREKYGWNELAKEKGKPLWKLVLEQFDDMLVKILLVAAFVSFLLAYIQGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESIKVLRDGYSVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLRLEQSSLTGEAMPVLKGTNPIFLDDCELQAKENMVFAGTTVVNGSCVCIVITTAMNTEIGKIQKQIHEASLEESDTPLKKKLDEFGSRLTTSIGIVCLVVWIINYKNFISWDVVDGWPTNIQFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVMEFFTLGGKTTASRVLRVEGTTYDPQDGGIVDWTCYNMDANLLAIAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDIKSRNKTRDMQGAANNTMDDTLKLGCSEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERSSFVQLADGSLVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICKEIGLFSRDEDLTGQSLTGKEFTSLSHSEQVKLLLRNGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAIAEGRAIYNNMKAFIRYMISSNVGEVISIFLAAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKSDDALISTWVLFRYLIIGSYVGIATVGIFVLWYTQASLFGINLVSDGHTIIELSQLLNWRECPSWSNFTVSSFDAGGGRLIAFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRTLPPWRNPWLLVAMTLSLGLHCVILYIPFLSEVFGVTPLSLKEWFLVILISAPVILIDEILKFVVRSQRKKTKEKEA 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04223 1068 SFLD p-type atpase 364 797 IPR044492 -
Vivi7g04223 1068 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 393 643 - -
Vivi7g04223 1068 Gene3D - 78 1057 - -
Vivi7g04223 1068 SFLD C1.7: P-type atpase like 364 797 - -
Vivi7g04223 1068 SUPERFAMILY Calcium ATPase, transduction domain A 154 263 IPR008250 -
Vivi7g04223 1068 PANTHER CALCIUM-TRANSPORTING ATPASE 32 1065 - -
Vivi7g04223 1068 Pfam Cation transporting ATPase, C-terminus 829 1055 IPR006068 -
Vivi7g04223 1068 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 390 640 IPR023299 GO:0000166
Vivi7g04223 1068 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 1061 IPR023298 -
Vivi7g04223 1068 SUPERFAMILY HAD-like 381 848 IPR036412 -
Vivi7g04223 1068 CDD P-type_ATPase_SERCA 28 1057 - -
Vivi7g04223 1068 ProSitePatterns E1-E2 ATPases phosphorylation site. 385 391 IPR018303 -
Vivi7g04223 1068 Pfam Cation transporter/ATPase, N-terminus 28 95 IPR004014 -
Vivi7g04223 1068 SMART Cation_ATPase_N_a_2 26 100 IPR004014 -
Vivi7g04223 1068 FunFam Calcium-transporting P-type ATPase, putative 638 789 - -
Vivi7g04223 1068 PRINTS P-type cation-transporting ATPase superfamily signature 636 647 - -
Vivi7g04223 1068 PRINTS P-type cation-transporting ATPase superfamily signature 768 780 - -
Vivi7g04223 1068 PRINTS P-type cation-transporting ATPase superfamily signature 658 668 - -
Vivi7g04223 1068 PRINTS P-type cation-transporting ATPase superfamily signature 383 397 - -
Vivi7g04223 1068 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Vivi7g04223 1068 PRINTS P-type cation-transporting ATPase superfamily signature 201 215 - -
Vivi7g04223 1068 Gene3D - 45 267 - -
Vivi7g04223 1068 FunFam Calcium-transporting ATPase, putative 130 265 - -
Vivi7g04223 1068 Pfam haloacid dehalogenase-like hydrolase 380 758 - -
Vivi7g04223 1068 NCBIfam HAD-IC family P-type ATPase 320 408 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi7g04223 1068 NCBIfam HAD-IC family P-type ATPase 717 829 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi7g04223 1068 Gene3D - 380 789 IPR023214 -
Vivi7g04223 1068 FunFam Calcium-transporting ATPase, putative 233 379 - -
Vivi7g04223 1068 PRINTS Sodium/potassium-transporting ATPase signature 376 397 - -
Vivi7g04223 1068 PRINTS Sodium/potassium-transporting ATPase signature 997 1021 - -
Vivi7g04223 1068 Gene3D - 393 643 IPR023299 GO:0000166
Vivi7g04223 1068 Pfam E1-E2 ATPase 148 363 - -
Vivi7g04223 1068 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 808 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04223 Vivi-Chr7 110474367 110478640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04223 21 1066 Primary Pumps ATPases(2) AT4G00900 78.190 0.0 1696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04223 K01537 - gmx:100792952 1872.44