Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04218 ATGTTTTATTACAAACTCATTGGTCTATCATTTCTCGTTACTCCCATCATTTGTTTCATAATCCGATGGCTATTATTCAAAACTGGATTAATATACGCCACGAAGAAACTTGAAAGAAAACTACAAGATTGTTTCTACGTCTATCAATACCTTAAAGTCCCCGAAATCAACGAAAACATGCAACGAAACGAGTTATATCGTAAAGTTTCTCTCTATTTACATTCTCTCCCTTCTCTCGAAGATTCCGATTTCACAAACCTCATTACCGGTCATAACCAAAACGACATCGTTTTATCTCTCGACTCTAATCAAATCATCGAAGACCGTTTTCTCGGCGCTAATCTCTTTTGGTTCAACCAAAAAACCGAACCGGGTCATCAAACCGGTGTTTTCGTTCTCAAGATCAGAAAAACCGATAAACGAAGAATCCTCAGAAGCTATCTCCGTCATATTCACGATGTCTCCGAAGAAATAGCGAAACGCGACTTACGCTTATTCGCTAATATCGCCGGAGACAATAACGAAACGAGATGGAAATCCGTTCCGTTTAGTCATCCAGCGACGTTTGACACCATGGCCATGGAAAATGATCTCAAGAACAAAATCAAAACCGATCTCGAATCGTTTCTCAAAGCGAAGCCATATTACCGACGACTCGGCCGCGCGTGGAAACGGAGCTTCTTGTTGTATGGTCCTTCCGGTACCGGTAAATCAAGCTTCGTCGCTGCAATGGCGAATTTTCTTTGTTATGATGTATATGATGTTGATCTCTCTCAGGTTCGTGGTGATTCAGATTTGAAGTTTCTCTTACTCGAAACGACGCCGAAATCGATAATTCTCGTGGAGGATCTGGACAGGTTTGTGACGGAGGAATCGGAATGTTCAACGGTTACGGTGGCCGGAATTCAGAATTTCATGGACGGGATATTAAGTTCGTGTGGCGGCGAGGAGAGGATTCTGGTTTTCACGATGAGCAGTAAGGAATGTGTTGACCCGGGTTTTCTCCGACCGGGTCGGGTCGACGTTCATATCCATTTCTCATGGTGTGATTTCTCGTCCTTCAAAACCCTAGCCTGTAACTACCTAGGAGTGAAGGACCACAAGCTGTTTCCTCAGGTGGAGGAAATTTTCCGGCACGGCGCGAGTTTAAGCGCGGCGGAGATCAGCGAGTTGATGATTGCGAACCGGAACTCGCCGAGTCGGGCTATTAAATCGGTTATCGGGGCGTTACAAACGGACGGTGATGGGAGGGGTGTTGGGGATTTGATCGTACGGCAGATAGAGGGTAATGACGTGGAGGGATCTCAGAAACAAGGTTCTATTGGTGGTGGGGATGGATCCTCTACGGGTAAGGATTTGAGGAAAATTTATAGTATGTTTAGATTAAGGAATAGGAAAAGAAATCGAACGGCTAATTTAGCTCTCAATGATGAAGGTTGA 1440 0.4444 MFYYKLIGLSFLVTPIICFIIRWLLFKTGLIYATKKLERKLQDCFYVYQYLKVPEINENMQRNELYRKVSLYLHSLPSLEDSDFTNLITGHNQNDIVLSLDSNQIIEDRFLGANLFWFNQKTEPGHQTGVFVLKIRKTDKRRILRSYLRHIHDVSEEIAKRDLRLFANIAGDNNETRWKSVPFSHPATFDTMAMENDLKNKIKTDLESFLKAKPYYRRLGRAWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDVDLSQVRGDSDLKFLLLETTPKSIILVEDLDRFVTEESECSTVTVAGIQNFMDGILSSCGGEERILVFTMSSKECVDPGFLRPGRVDVHIHFSWCDFSSFKTLACNYLGVKDHKLFPQVEEIFRHGASLSAAEISELMIANRNSPSRAIKSVIGALQTDGDGRGVGDLIVRQIEGNDVEGSQKQGSIGGGDGSSTGKDLRKIYSMFRLRNRKRNRTANLALNDEG 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04218 479 Gene3D - 345 407 - -
Vivi7g04218 479 Gene3D - 178 344 IPR027417 -
Vivi7g04218 479 Pfam ATPase family associated with various cellular activities (AAA) 228 346 IPR003959 GO:0005524|GO:0016887
Vivi7g04218 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 405 IPR027417 -
Vivi7g04218 479 PANTHER BCS1 AAA-TYPE ATPASE 38 411 - -
Vivi7g04218 479 Pfam Domain associated at C-terminal with AAA 32 118 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04218 Vivi-Chr7 110380222 110382121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04218 219 346 Calmodulin-binding Proteins AT3G56690 27.143 1.52e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04218 7 110380222 110382121 Vivi7g04218 7 110380222 110382121 ECH
Vivi6g05312 6 157854773 157856658 Vivi7g04218 7 110380222 110382121 PCT