Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04201 ATGGGTCTTGTTGAAAAGAGTCCAAAGAGTTTTCATTTGCATAGACAACAACAACTCCAAAAGCAAGAGTTCAAAGGTGTTCCAAAAGGGTTCATGGCAATCAAAGTAGGTCAAGGAGAAGATCAACAAAGGTTTGTTGTTCCTGTTATGTACTTCAATCATCCTCTTTTCATTCAACTATTGAAAGAGGCAGAAGAAGAATATGGATTTGATCAAAAAGGAACTATCACTATTCCTTGTCATGTTGAAGAATTCAGAAACGTTCGTGGTTTGATTGATAGAGGCAAAAATCTTCACCAACATGTTGGTTGTTTTGGTTTATGA 324 0.3611 MGLVEKSPKSFHLHRQQQLQKQEFKGVPKGFMAIKVGQGEDQQRFVVPVMYFNHPLFIQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRGKNLHQHVGCFGL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04201 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 87 IPR003676 GO:0009733
Vivi7g04201 107 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04201 Vivi-Chr7 109896318 109897057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04201 27 99 Calmodulin-binding Proteins AT5G20810 47.297 3.45e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04201 K14488 - gmx:111188139 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04201 7 109896318 109897057 Vivi7g04201 7 109896318 109897057 ECH