Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04173 ATGGCTGATATGGATGCGCACGGCTCGGGGAACAGTCAAATAATTGAAATCAGTGTAGATCTTAATGATCCAGGAAGGAAGATTTGTGGGGAAGCACCGTGTGGATTCTTAGATGCTGGATCCATCTCTCTGGATTCCAAAGAACGTTCAACTTCCATGCGGAAGCTTTTGACGGCGGTGATCCTGTGCGTCATTTTCATGACCGTTGAACTAGTTGGTGGTATCAAAGCAAACAGTCTTGCAATATTGACTGATGCAGCTCATCTTCTTTCTGATGTTGCAGCTTTTGCCATCTCCTTGTTTTCTTTATGGGCTGCGGGATGGGAAGCTACTCCTCGTCAATCGTACGGGTTTTATAGAATAGAGATTCTCGGCGCTTTGGTTTCTATCCAATTGATATGGCTGCTTGCTGGGATTATTGTATACGAAGCCATAGATAGACTCATTACTGGTTCTAAAAATGTGGATGGGTTTATAATGTTTCTAGTCGCTGCATTTGGTCTTGTGGTTAACATAATTATGGCCGTGTTATTAGGTCACGATCACGGTCATGGCCACGGTCATGGTCATGGTCACGATCATGGCCATGACCATGGACACAGTCATCATGGCCACAGTCACGGACTTACAGTTTCTACTCATGATCTTACAAAAGACGAGCACCATCATCATACTCACGACAACGCCACTCACCATGACGACGAAAATCATTCAAAAGCTCAACACAATCATAGTCACGAAGATCACATTCACCATCACACCGACGAAGGTGTTACCGAACCACTTCTCGCCGAATCAAAAGACAAGCCCAAGAAGAAGAGAAACATAAACGTGCAGGGCGCTTATCTCCACGTACTCGGTGACTCCATCCAAAGTATCGGAGTAATGATTGGAGGAGCAGTGATATGGTATAAACCAGAATGGAAAATAGTCGATTTAATTTGCACTCTCATCTTTTCAGTAATTGTTTTAGGGACAACAATCAACATGTTGCGAAACATTTTGGAAGTTCTAATGGAAAGCACACCTCGAGAGATCGATGCTACTCAGCTTGAAAGGGGGATATTAGATATTGAAGAAGTAGTGGCTGTTCATGAGCTGCACATTTGGGCCATTACAGTTGGGAAGATTTTATTAGCATGTCATGTTAAAATCAACCGCGATGCTGACGCAGACGTGGTGTTGGACAAAGTTGTAGACTACATCAAAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1254 0.4338 MADMDAHGSGNSQIIEISVDLNDPGRKICGEAPCGFLDAGSISLDSKERSTSMRKLLTAVILCVIFMTVELVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFYRIEILGALVSIQLIWLLAGIIVYEAIDRLITGSKNVDGFIMFLVAAFGLVVNIIMAVLLGHDHGHGHGHGHGHDHGHDHGHSHHGHSHGLTVSTHDLTKDEHHHHTHDNATHHDDENHSKAQHNHSHEDHIHHHTDEGVTEPLLAESKDKPKKKRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWKIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLERGILDIEEVVAVHELHIWAITVGKILLACHVKINRDADADVVLDKVVDYIKRVYNISHVTIQIER 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04173 417 NCBIfam cation diffusion facilitator family transporter 53 417 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi7g04173 417 MobiDBLite consensus disorder prediction 208 272 - -
Vivi7g04173 417 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 23 417 - -
Vivi7g04173 417 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 345 416 IPR036837 -
Vivi7g04173 417 Gene3D Cation efflux protein transmembrane domain 52 338 IPR027469 -
Vivi7g04173 417 SUPERFAMILY Cation efflux protein transmembrane domain-like 50 340 IPR027469 -
Vivi7g04173 417 MobiDBLite consensus disorder prediction 184 272 - -
Vivi7g04173 417 Pfam Cation efflux family 56 339 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04173 Vivi-Chr7 109179313 109181628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04173 4 417 Inorganic Solute Cotransporters AT2G46800 65.721 1.89e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04173 K14689 - gmx:100794876 589.726