Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04169 ATGGATGCGCACGGCTCGGGGAACAGTCAAATAATTGAAATCAGTGTAGATCTTAATGATCCAGGAAGGAAGATTTGTGGGGAAGCACCGTGTGGATTCTTAGATGCTGGATCCATCTCTCTGGATTCCAAAGAACGTTCAACTTCCATGCGGAAGCTTTTGACGGCGGTGATCCTGTGCGTCATTTTCATGACCGTTGAACTAGTTGGTGGTATCAAAGCAAACAGTCTTGCAATATTGACTGATGCAGCTCATCTTCTTTCTGATGTTGCAGCTTTTGCCATCTCCTTGTTTTCTTTATGGGCTGCGGGATGGGAAGCTACTCCTCGTCAATCGTACGGGTTTTATAGAATAGAGATTCTCGGCGCTTTGGTTTCTATCCAATTGATATGGCTGCTTGCTGGGATTATTGTATACGAAGCCATAGATAGACTCATTACTGGTTCTAAAAATGTGGATGGGTTTATAATGTTTCTAGTCGCTGCATTTGGTCTTGTGGTTAACATAATTATGGCCGTGTTATTAGGTCACGATCACGGTCATGGCCACGGTCATGGTCATGGTCACGATCATGGCCATGACCATGGACACAGTCATCATGGCCACAGTCACGGACTTACAGTTTCTACTCATGATCTTACAAAAGACGAGCACCATCATCATACTCACGACAACGCCACTCACCATGACGACGAAAATCATTCAAAAGCTCAACACAATCATAGTCACGAAGATCACATTCACCATCACACCGACGAAGGTGTTACCGAACCACTTCTCGCCGAATCAAAAGACAAGCCCAAGAAGAAGAGAAACATAAACGTGCAGGGCGCTTATCTCCACGTACTCGGTGACTCCATCCAAAGTATCGGAGTAATGATTGGAGGAGCAGTGATATGGTATAAACCAGAATGGAAAATAGTCGATTTAATTTGCACTCTCATCTTTTCAGTAATTGTTTTAGGGACAACAATCAACATGTTGCGAAACATTTTGGAAGTTCTAATGGAAAGCACACCTCGAGAGATCGATGCTACTCAGCTTGAAAGGGGGATATTAGATATTGAAGAAGTAGTGGCTGTTCATGAGCTGCACATTTGGGCCATTACAGTTGGGAAGATTTTATTAGCATGTCATGTTAAAATCAACCGCGATGCTGACGCAGACGTGGTGTTGGACAAAGTTGTAGACTACATCAAAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1245 0.4337 MDAHGSGNSQIIEISVDLNDPGRKICGEAPCGFLDAGSISLDSKERSTSMRKLLTAVILCVIFMTVELVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFYRIEILGALVSIQLIWLLAGIIVYEAIDRLITGSKNVDGFIMFLVAAFGLVVNIIMAVLLGHDHGHGHGHGHGHDHGHDHGHSHHGHSHGLTVSTHDLTKDEHHHHTHDNATHHDDENHSKAQHNHSHEDHIHHHTDEGVTEPLLAESKDKPKKKRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWKIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLERGILDIEEVVAVHELHIWAITVGKILLACHVKINRDADADVVLDKVVDYIKRVYNISHVTIQIER 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04169 414 Gene3D Cation efflux protein transmembrane domain 49 335 IPR027469 -
Vivi7g04169 414 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 337 IPR027469 -
Vivi7g04169 414 MobiDBLite consensus disorder prediction 181 269 - -
Vivi7g04169 414 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 342 413 IPR036837 -
Vivi7g04169 414 NCBIfam cation diffusion facilitator family transporter 50 414 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi7g04169 414 MobiDBLite consensus disorder prediction 205 269 - -
Vivi7g04169 414 Pfam Cation efflux family 53 336 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi7g04169 414 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 22 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04169 Vivi-Chr7 109179313 109182006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04169 1 414 Inorganic Solute Cotransporters AT2G46800 65.721 1.84e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04169 K14689 - gmx:100794876 589.726