Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04164 ATGGCTCCTTCACTAGAAACCATTAATGGTGAAGCAAAGCACCTTACACAAGGAGGAAATGTTCATGAAGAAGATGGCATAGTTTTTGCTTTGAACTTGATTACATCCGTCGTGCTTCCACTCACCGTCCGATCTGCAATTGAGCTTGGCATCTTCGACATTTTAGCCAAAGTTGGAAAAGATGCCAAGCTCTCTGCAGATGACATAGCGGTTAAGATTGGATCCAAGAACGCGGAAGCACCCGCCATGCTGGATCGTCTTCTAAGACTATTGGCTAGTCACTCCATGCTACATTGTTCGTTATCCGAGGAGAAACAAGGACATGGATCTCCTCAGAGGCTCTATAGCCTTGCTCCTGCCTCTAAGTATTTTGTAACAGATGCTGATGGTGTGTCTTTAGGTGCAACATTAAACCTTCCTTTGGACAAAGTTTTCTTGGGAAGCTGGACTGAAATGAAAGGAGCAATATTGGAAGGAGGTATACCATTCAATAGGGTTTATGGCATGCATGCATTTGAATATCCAAGTGTAGATCCAAGGTTCAATGATGTTTTCAACAAATCTATGGTCAATTGTACAACTATAATCACAAAGAGGATTCTTGAGATCTATGATGGTTTTGAGCACATCAATAAGCTTGTAGATGTTGGTGGTGGTCTTGGGATCAATCTCAAACTAATTACTTCTAAATATCCTCATATTCAAGGTGTTAATTTTGACTTGCCACATGTTGTAGAACATGCACCTATCTATGAAGGTGTGACACATGTGGGAGGAGATATGTTTGAGAGTGTACCTAATGGAGATGTTATTTTCTTGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCTTGAAGTTATTGAAGAATTGTCATAAAGCTATTCCTGATAATGGAAAAGTGATAGTTGTGGACTCAATTATGCCTGTTTTTCCAGAGAGTACAAAGGTTGCTAATATGGGATTCCAAGCTGACCTCTTAATGATGGCACAAAATCCAGGAGGGAAAGAGAGAACAGAAGATGAGTTCAAGGAGTTGGCATTAAGATCTGGATTTAGTGAAGTCAAACTTGCGTGTTACTTCTCTGGCTTTTGGGTTTTGGAATTCTTGAAGTAG 1119 0.4039 MAPSLETINGEAKHLTQGGNVHEEDGIVFALNLITSVVLPLTVRSAIELGIFDILAKVGKDAKLSADDIAVKIGSKNAEAPAMLDRLLRLLASHSMLHCSLSEEKQGHGSPQRLYSLAPASKYFVTDADGVSLGATLNLPLDKVFLGSWTEMKGAILEGGIPFNRVYGMHAFEYPSVDPRFNDVFNKSMVNCTTIITKRILEIYDGFEHINKLVDVGGGLGINLKLITSKYPHIQGVNFDLPHVVEHAPIYEGVTHVGGDMFESVPNGDVIFLKWILHDWSDEHCLKLLKNCHKAIPDNGKVIVVDSIMPVFPESTKVANMGFQADLLMMAQNPGGKERTEDEFKELALRSGFSEVKLACYFSGFWVLEFLK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04164 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Vivi7g04164 372 FunFam Caffeic acid 3-O-methyltransferase 9 124 - -
Vivi7g04164 372 FunFam Caffeic acid O-methyltransferase 125 372 - -
Vivi7g04164 372 Gene3D - 10 124 IPR036388 -
Vivi7g04164 372 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Vivi7g04164 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
Vivi7g04164 372 PIRSF O-mtase 9 372 IPR016461 GO:0008168
Vivi7g04164 372 PANTHER O-METHYLTRANSFERASE 34 353 IPR016461 GO:0008168
Vivi7g04164 372 SUPERFAMILY "Winged helix" DNA-binding domain 22 127 IPR036390 -
Vivi7g04164 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 370 IPR029063 -
Vivi7g04164 372 Pfam Dimerisation domain 42 92 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04164 Vivi-Chr7 109052273 109054074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04164 20 372 Monolignol Biosynthesis Gene Families AT5G54160 51.841 7.39e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04164 K13066 - gmx:100789402 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04164 7 109052273 109054074 Vivi7g04164 7 109052273 109054074 ECH