Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04162 ATGGATTTGGTAGGACCCACCATGAACCGGTTGGTCGGAGATTACATACTGGGTCCTCGAATCGGGTCGGGTTCATTTGCAGTGGTGTGGCGTTCCCGTCATAGGAGTTCAGGTTTGGAGGTTGCTATTAAGGAGATTGATCAGACCCAATTGAGTCCCAAAGTTAGAGATAATCTCATCAAAGAGATTACTATTCTTAGAACTATTCGTCACCCTAACATCATTCGACTTTTTGAAGCTATTGAGACCAATGATAGGATTTACCTTGTTTTGGAGTATTGTGGTGGAGGGGACCTTGCTGCTTACATACATCGATATGGGAGAGTTTCGGAATCCATTGCTAGACATTTCATGAGGCAATTGGCTGCTGGATTGCAAGTGCTTCAAGAAAAGAACCTCATACATAGAGATTTAAAACCACAGAACTTACTGTTGGAAACTACTTCAGCTACACCACTTATGAAAATCGGGGATTTTGGTTTTGCACGGTCTCTCACGCCTCTGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCTCCCGAGATAATTCAGAGTCAGAAATATGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATATTGTATCAGCTAGTGGTCGGGAAACCGCCATTCGATGGAAATAGTCAGTTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAGCTGCACTTTCCATCAAACATTTTAAAAGATCTGCATCCTGATTTTGTGGATCTTTGCAGAAGCCTTTTACGTCGAAATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAATTTCCTACATGATCACAGGTCTGTTGTGAATATTGAGCAGTTTCATTCGCATCAATCAGAAAGCTCGATAGTTGATCAATTAGTTGGCCCTGCATTCGAGAAGGTGTCTCAAGCACATTCCGAGTATCGCGTTGAAACTGAAAGTGCTAAAGGGTCAACTCAAACTATTGCACTCAATAAGCCTGGGAAGTCTATTGATACCGTTTCTCATTTAATGGAGTCCATTGAGAAAGGTTATGTCCTCATCAACCCTCATTTTGCATCATTGGAGGATTTCTCGGACTACTTTGAGGCATCCGTGCATGATAATCCCTCTAGCGGGGTTTCTATCCGTGCTTCAGAGACAACTAACCTGGAAATCGGAAAGCAAACAACAAACTTTTCTTTAGGGAACCCTTCGAACAAGTTAGAGTTGTTGCATCAGTATGTGCAAGTCCTCGGAGAACTTTCACAGGAAAAGTACAACACAGGACTGTATCTAGAATCACTCACAGTTGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTCTAGACATTTGTAGCACTTGGTTAGCCCCAATTTCTAAGAACGAGTTTCACGAAAGCAGTTCAGTTAACGAGTCCGTAATTGCCCGTGGAGACGCGAGCTTATCACATACTACCGATCATAAAATAAATTTCAACGACCGTCCTTCCGTCTCCTTGTGGGCCAAACATGAATTTATCACCGCAGTCGATCGTGCTGAGAAACTATCATGTCATATTCAAAACATGGATGGTGCAGTTGAGATGCCAGACGCAATCGAGATTATATTCAGACAAGCACTCTTAATAGGGACAAATGGTGCTGTTGATGAGTACATGAATAACAAAGATAAGTCAGCTGCATCTTACTCAAAAGCAATGCTTCTACTTTCATTCATCGTGGAAGAAGCAGAGAACCTTCCACTGAACCCTCCATTTTCACTTCTTGCCGACGATCATAAGCGAATTGTGCAATATATTCACAACTTGCAGTTTCGCAAGATCTCGTTATCAGAGTCGTCTTCTGAGGAAGCTCAATAG 1857 0.4222 MDLVGPTMNRLVGDYILGPRIGSGSFAVVWRSRHRSSGLEVAIKEIDQTQLSPKVRDNLIKEITILRTIRHPNIIRLFEAIETNDRIYLVLEYCGGGDLAAYIHRYGRVSESIARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLETTSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELHFPSNILKDLHPDFVDLCRSLLRRNPDERLTFKAFFNHNFLHDHRSVVNIEQFHSHQSESSIVDQLVGPAFEKVSQAHSEYRVETESAKGSTQTIALNKPGKSIDTVSHLMESIEKGYVLINPHFASLEDFSDYFEASVHDNPSSGVSIRASETTNLEIGKQTTNFSLGNPSNKLELLHQYVQVLGELSQEKYNTGLYLESLTVELVVLAIWKKALDICSTWLAPISKNEFHESSSVNESVIARGDASLSHTTDHKINFNDRPSVSLWAKHEFITAVDRAEKLSCHIQNMDGAVEMPDAIEIIFRQALLIGTNGAVDEYMNNKDKSAASYSKAMLLLSFIVEEAENLPLNPPFSLLADDHKRIVQYIHNLQFRKISLSESSSEEAQ 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04162 618 FunFam Serine/threonine-protein kinase ATG1 7 316 - -
Vivi7g04162 618 Gene3D Transferase(Phosphotransferase) domain 1 6 342 - -
Vivi7g04162 618 CDD STKc_ATG1_ULK_like 21 272 - -
Vivi7g04162 618 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04162 618 SUPERFAMILY Protein kinase-like (PK-like) 11 295 IPR011009 -
Vivi7g04162 618 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Vivi7g04162 618 FunFam Non-specific serine/threonine protein kinase 4 95 - -
Vivi7g04162 618 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04162 618 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 482 IPR045269 GO:0004674|GO:0006914
Vivi7g04162 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Vivi7g04162 618 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04162 Vivi-Chr7 109030502 109034804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04162 5 263 CBL-interacting serine-threonine protein kinases AT2G30360 35.472 5.17e-51 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Vivi7g04162 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04162 - K08269 tpra:123884297 940.258