Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04161 ATGACTTCTTTTGTTACTATTATCATTTTGGAGCTTCTTTTGTTGTTCTTCCCTTTTACTTCTTCTCAAAAACAACTTCAAACTAAACTAGTTCAACCACCTTTGCTACCAAATTCATGCAACGAAACATGTGGAAAACATCATGTTCCATTTCCATTCTATCTCAACAACACTTCATGTGCATCATCATCATTCTCATCTTCTTTTCACCTCACTTGCACAAACTCATCCACCCTTTTCATCAAACTAGCTTCACAAAACTATCCCATTTTGGACTTCTTCTCAGACGGTTTACTAGTAGACTTCCCCGGCGCGTCGTCCTGTCGCCAATACAACGATTTAAACTCATTCGGCGAGAGGTTTTTCGATGGAAAGAACTATTTCGGAGTATCGGTTGATAACATTGTTGGCCTCTATGATTGCGAGGATTCTTCGCTTTGTAAAGCGGATTGTGAAACGGTTAATCTCCCTGGTTGTGATGGAAGTGTAGGAGGAGGTGGTTCTCTTGGATGTTGCTATCCACTTTCTGATCATAGTGTATGGCATGTTGGTGAAGGTTTTTCAGTTTTTTCGAAGTTTGGATGTAGGGGGTTTTCTAGTTGGGCTGTTTTGAGAGGCTCTTATTCAGGTAAAAGAGGAGTGAAATTGGAATTTGCTATTCCTAGGAACTTTTCTGAGATGATTTGTGCTAAGAATGCTGATGTTGTGAATTCTACATCGGTTAAAGATGGTGTAAGGTGTGTTTGTCAAGATGGTTATGTTGGCGATGGTTTTGCTAATGGGACAGGATGTTTACTATCATGTATCAAAGATGGAAAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACATGATCAAAGAAAAATGGTCATCATTGCTGGAATCCTTTGTCCAGTTCTTATTGTTGCCTCCTTAGCCACACTATTTTATCTTCTAAGACGAAAAGAAAAGCCGGGAATGTTCGATTCCGAGCAAGCTTATTACCACAACATTTCCTTCCGAAAACCGTGTAGAACTCGACTATTCAGCCACCATGAATTAGAAGATGCCACCAACGGTTTCGAAGAGAGCAGAAAACTCATGCAATGCAATAACAGCACAATGTTTGCAGGTGTCCTTGGTGATGGATCACATGTAGCTATACACAAGTTATCAAAATGCGAGAACGAAAAAGACATGATCCAAGTCATGTCACAAATCGAAGTCCTATCGTCTATTCTACATCGAAATGTTGCGTCGATTCTTGGCTGTTGCGTTGATTCTAACTACGCGCCTCTAGTGATTTACGAATATCCTGCAAATGGTACTTTAGAGGAGCATTTACATCAAAAGTTTCAAAACAAAGGACAAAAACTCGGTTTAGATTGGTATAGAAGATTGAACATTGCAACCGAAATCGCTAATACTATTGCATTGTTACATTATGATAAATCTCCTCCAATATTTCATCATAACCTAAAGTCAAGTTGCATATTCCTAGATGATGATTTTTCAGCCAAGATTGCAGGATTTGGACTAGTTAATTATGATTACACGAAATGCGAAAATCGCGAACGATACCGCATATGCAAAAACGATGTATATGACATAGGTGTGATGCTACTTGAGATTATCTATGGATCAAATCAAATGGACTCGCCTACATTAGCATTGAAGAAAATTAGGGACGGGAAGATCGAGGAAATTGTTGATCCGGTTCTTGAATATCACGAGCAACCGCATTATTGTCAAGAACAGATTCAGATTATTGCTGATCTTGCAACAAGATGTTTGCTGTTTGGTGCAGATGGAAAGATGGGAATGGTTGATGTTGCTAGGGAGTTGGTTCATTTGAGTAAAGAGAGTGTTGATGGTGGGAATGTGAAAGGACTTGTGCTTGAAGAAACATTCTCGAATTCGAGTCTTCTTCAAATGATATCTCTGTCTCCTGATTCTATGAATGTTCCTTGA 1953 0.3917 MTSFVTIIILELLLLFFPFTSSQKQLQTKLVQPPLLPNSCNETCGKHHVPFPFYLNNTSCASSSFSSSFHLTCTNSSTLFIKLASQNYPILDFFSDGLLVDFPGASSCRQYNDLNSFGERFFDGKNYFGVSVDNIVGLYDCEDSSLCKADCETVNLPGCDGSVGGGGSLGCCYPLSDHSVWHVGEGFSVFSKFGCRGFSSWAVLRGSYSGKRGVKLEFAIPRNFSEMICAKNADVVNSTSVKDGVRCVCQDGYVGDGFANGTGCLLSCIKDGKEAYGSDCYIKRHDQRKMVIIAGILCPVLIVASLATLFYLLRRKEKPGMFDSEQAYYHNISFRKPCRTRLFSHHELEDATNGFEESRKLMQCNNSTMFAGVLGDGSHVAIHKLSKCENEKDMIQVMSQIEVLSSILHRNVASILGCCVDSNYAPLVIYEYPANGTLEEHLHQKFQNKGQKLGLDWYRRLNIATEIANTIALLHYDKSPPIFHHNLKSSCIFLDDDFSAKIAGFGLVNYDYTKCENRERYRICKNDVYDIGVMLLEIIYGSNQMDSPTLALKKIRDGKIEEIVDPVLEYHEQPHYCQEQIQIIADLATRCLLFGADGKMGMVDVARELVHLSKESVDGGNVKGLVLEETFSNSSLLQMISLSPDSMNVP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04161 650 Gene3D Transferase(Phosphotransferase) domain 1 434 622 - -
Vivi7g04161 650 Gene3D Phosphorylase Kinase; domain 1 328 432 - -
Vivi7g04161 650 SUPERFAMILY Protein kinase-like (PK-like) 336 609 IPR011009 -
Vivi7g04161 650 Pfam Protein tyrosine and serine/threonine kinase 371 514 IPR001245 GO:0004672|GO:0006468
Vivi7g04161 650 Pfam Wall-associated receptor kinase galacturonan-binding 40 93 IPR025287 GO:0030247
Vivi7g04161 650 ProSiteProfiles Protein kinase domain profile. 355 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04161 650 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 36 613 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04161 Vivi-Chr7 109012404 109014964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04161 40 612 Receptor kinase-like Gene Family AT2G23450 29.260 8.90e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Vivi7g04161 PK_Tyr_Ser-Thr 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04161 - - gmx:100810557 893.264