Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04157 ATGGAGTTGTTGCAAGAAGTGAAAGGCTATTCACAAGAGGAAGAGGAAGAAGAAGAAATCATAACAAGAACAACAAAAGAAGATGAAAACAGAATCAATCATCATCATCATCACTCTCCTGAGTCTCACAATTCATCTTCTGGTGGATTAGGGCTATTACACCAACATCATCATCATCATCAACATCAAGATGCTACAACAACAACAACAACCTCGAATTTCAAAAATCAAACAAGTTTAAAACAAATTGATTTCATGGAATTATCACTAGGTAGCAACAGCAGCATCATCAACAAAGATCCTAGTTCTTCGAATGCAAACATAAACAACCTACATCAACCGCAAGAGCAGCAACAGCAACAACCTAGTACTCATGAAAAAGAGCACATGTTCGACAAAGTTGTAACCCCGAGTGATGTTGGAAAACTGAACCGTTTAGTGATACCGAAACAGCATGCTGAGAAGTATTTCCCTCTCGATTCAACCTCGAATGAGAAAGGCCTTCTTCTCAATTTCGAAGATCGAAATGGAAAATTGTGGAGATTCAGATACTCTTATTGGAACAGTAGTCAAAGCTATGTCATGACAAAAGGTTGGAGCCGTTTTGTCAAAGAGAAAAAACTTGATGCCGGTGACATTGTTTCGTTTCAACGAGGCGTTGGCGATTTGTTTCGACATCGATTGTTTATCGATTGGAGGAGGAGAACTAATCATAACCATAATATGGATCCTTCAGCAACACTTTTCACTCCTTTCTTTCTTCCTAATCAACAGCAATATTCTATTAGATGGGGAGGTGCTAATAGTAGATTCTACTCACTTCCTTATCCTTCACCACAATCACAAAGGTTACAACAACAAAATCTTCATGACCCTTTACAGAATCAGATGAATTACAATTACCAAATGTATCCATTTCACCAACAAGGTGTTAATGCGAATCCGAATTACAATTTTCATCATCATGATCCAAGTTCTCTCTTTTACATGAGATCATCGTTACCATCGGCGCCGTCGATGGTTGATCAAGGAAGCTTAACAAGACAACAAGGAGGAGGAGGAGGAGGAGTAGGAGTAGGAGGAGACAATGTTCCAAACATGATTATTGATTCTGTTCCTGTTTCTCATCATTATCATCAACAACATGGTGGTTTTTCTAGCAGTGGAAATTTTACTAGTTCTAGTACAATGGCTAGTAGTAGTATTAATGGTGCTGCAAAAAGGTTAAGGTTGTTTGGTGTGAACATGGAATGTGGATCTTCAACAAGTGATGATAATTTGCCTAATTCACTTCCTTCTTCTTCAAATTTGAGAGAAACATTTTCAACATCATCAACAACATTTGAAGAGGACAAGAAAAGAGAAGCTTCATTGATTTTTGGTTTAGACCCTTCTTTGCAATATCATAATTTCCATCAACAATGA 1425 0.3768 MELLQEVKGYSQEEEEEEEIITRTTKEDENRINHHHHHSPESHNSSSGGLGLLHQHHHHHQHQDATTTTTTSNFKNQTSLKQIDFMELSLGSNSSIINKDPSSSNANINNLHQPQEQQQQQPSTHEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGDLFRHRLFIDWRRRTNHNHNMDPSATLFTPFFLPNQQQYSIRWGGANSRFYSLPYPSPQSQRLQQQNLHDPLQNQMNYNYQMYPFHQQGVNANPNYNFHHHDPSSLFYMRSSLPSAPSMVDQGSLTRQQGGGGGGVGVGGDNVPNMIIDSVPVSHHYHQQHGGFSSSGNFTSSSTMASSSINGAAKRLRLFGVNMECGSSTSDDNLPNSLPSSSNLRETFSTSSTTFEEDKKREASLIFGLDPSLQYHNFHQQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04157 474 MobiDBLite consensus disorder prediction 420 444 - -
Vivi7g04157 474 MobiDBLite consensus disorder prediction 94 128 - -
Vivi7g04157 474 SMART B3_2 131 236 IPR003340 GO:0003677
Vivi7g04157 474 MobiDBLite consensus disorder prediction 420 449 - -
Vivi7g04157 474 MobiDBLite consensus disorder prediction 94 121 - -
Vivi7g04157 474 CDD B3_DNA 129 218 IPR003340 GO:0003677
Vivi7g04157 474 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 30 428 IPR044800 GO:0003700
Vivi7g04157 474 Pfam B3 DNA binding domain 131 235 IPR003340 GO:0003677
Vivi7g04157 474 MobiDBLite consensus disorder prediction 23 42 - -
Vivi7g04157 474 FunFam B3 domain-containing protein 124 244 - -
Vivi7g04157 474 Gene3D - 124 244 IPR015300 -
Vivi7g04157 474 ProSiteProfiles B3 DNA-binding domain profile. 131 236 IPR003340 GO:0003677
Vivi7g04157 474 SUPERFAMILY DNA-binding pseudobarrel domain 127 232 IPR015300 -
Vivi7g04157 474 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04157 Vivi-Chr7 108870766 108872987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04157 113 421 RAV Transcription Factor Family AT2G46870 44.516 6.07e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi7g04157 B3 3.2e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04157 K09287 - gmx:100781424 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04157 7 108870766 108872987 Vivi7g04157 7 108870766 108872987 ECH